RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 BEX2Q9BXY8 128 aa14.2□□□□□ -0.14
PHGDH-230ENST00000641927 BEX1Q9HBH7 125 aa14.2□□□□□ -0.14
PHGDH-230ENST00000641927 YAE1D1Q9NRH1 226 aa14.2□□□□□ -0.14
PHGDH-230ENST00000641927 SLC2A9Q9NRM0 540 aa14.2□□□□□ -0.14
PHGDH-230ENST00000641927 SVEP1Q4LDE5 3571 aa14.2□□□□□ -0.14
PHGDH-230ENST00000641927 TEX15Q9BXT5 2789 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 IGHV1-69DA0A0B4J2H0 117 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 NPFFO15130 113 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 IGHV1-69P01742 117 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 CD99P14209 185 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 KRTAP1-1Q07627 177 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 C1orf229Q6ZS94 237 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-230ENST00000641927 DRAXINQ8NBI3 349 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-230ENST00000641927 BVESQ8NE79 360 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 C5orf30Q96GV9 206 aa14.19□□□□□ -0.14
PHGDH-230ENST00000641927 LEUTXA8MZ59 168 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 SAA4P35542 130 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 CEACAM3P40198 252 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 DIAPH2-AS1Q14236 149 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 BRD3OSQ6XYD6 125 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 LHFPL4Q7Z7J7 247 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 CCDC71LQ8N9Z2 235 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-230ENST00000641927 ZBTB34Q8NCN2 500 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 RPEQ96AT9 228 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 SMR3AQ99954 134 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 DPM3Q9P2X0 92 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 HILPDAQ9Y5L2 63 aa14.18□□□□□ -0.14
PHGDH-230ENST00000641927 TEX13DA0A0J9YY54 714 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-230ENST00000641927 INMT-MINDY4F8WBC2 141 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 PGLYRP1O75594 196 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-230ENST00000641927 MIDNQ504T8 468 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 TGIF2LXQ8IUE1 241 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 OR51H1Q8NH63 302 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 NANPQ8TBE9 248 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 RTN4IP1Q8WWV3 396 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-230ENST00000641927 MARVELD1Q9BSK0 173 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 GAB2Q9UQC2 676 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 PROP1O75360 226 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 PEX14O75381 377 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 EPHA1P21709 976 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 MSMO1Q15800 293 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 C4orf46Q504U0 113 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 KLF17Q5JT82 389 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-230ENST00000641927 LDLRAD2Q5SZI1 272 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 MINOS1Q5TGZ0 78 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 ZNF833PQ6ZTB9 187 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 TBC1D26Q86UD7 250 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 ZNF251Q9BRH9 671 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 MINOS1-NBL1R4GNA1 71 aa14.17□□□□□ -0.14
PHGDH-230ENST00000641927 CSPG4Q6UVK1 2322 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 A8MV72 311 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-230ENST00000641927 MPPED1O15442 326 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 VAMP1P23763 118 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 PAX6P26367 422 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 ZNF137PP52743 207 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 LINC00205P59089 165 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 TAS2R31P59538 309 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 SSX2Q16385 188 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 TPTE2P1Q5T6R2 138 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 KCTD9Q7L273 389 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 SLC25A42Q86VD7 318 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 C17orf50Q8WW18 174 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 TCTEX1D2Q8WW35 142 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 CAPSLQ8WWF8 208 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 ST6GALNAC6Q969X2 333 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 TMEM230Q96A57 120 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 HSD17B10Q99714 261 aaKnown RBP14.16□□□□□ -0.14
PHGDH-230ENST00000641927 TMUB1Q9BVT8 246 aa14.16□□□□□ -0.14
PHGDH-230ENST00000641927 TBL2Q9Y4P3 447 aaKnown RBP14.16□□□□□ -0.14
PHGDH-230ENST00000641927 ACANP16112 2415 aa14.15□□□□□ -0.14
PHGDH-230ENST00000641927 RNF212BA8MTL3 300 aa14.15□□□□□ -0.14
PHGDH-230ENST00000641927 LY6LH3BQJ8 138 aa14.15□□□□□ -0.14
PHGDH-230ENST00000641927 GAPDHP04406 335 aaKnown RBP14.15□□□□□ -0.14
PHGDH-230ENST00000641927 RND3P61587 244 aa14.15□□□□□ -0.14
PHGDH-230ENST00000641927 TMEM128Q5BJH2 165 aa14.15□□□□□ -0.14
PHGDH-230ENST00000641927 GLDNQ6ZMI3 551 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-230ENST00000641927 SGPP2Q8IWX5 399 aa14.15□□□□□ -0.14
PHGDH-230ENST00000641927 MRPL20Q9BYC9 149 aaKnown RBP14.15□□□□□ -0.14
PHGDH-230ENST00000641927 LY6G6DO95868 133 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 DHFRP00374 187 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 OR4E1P0C645 316 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 VSIG10L2P0DP72 767 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 DUTP33316 252 aaKnown RBP14.14□□□□□ -0.15
PHGDH-230ENST00000641927 CATR1Q13166 79 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 OR2B11Q5JQS5 317 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 FAM120AOSQ5T036 256 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 FAM71F2Q6NXP2 309 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 ZNF66Q6ZN08 573 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 IL17RELQ6ZVW7 336 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 MOB3BQ86TA1 216 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 NAA60Q9H7X0 242 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 NUP50Q9UKX7 468 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 CRYM-AS1A6NIL9 109 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 LINC00473A8K010 186 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 HLA-AP01891 365 aaKnown RBP14.14□□□□□ -0.15
PHGDH-230ENST00000641927 CT45A6P0DMU7 189 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 CT45A5P0DMU8 189 aa14.14□□□□□ -0.15
PHGDH-230ENST00000641927 CT45A7P0DMV0 189 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms