RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CENPXA8MT69 81 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 LEUTXA8MZ59 168 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 TOR1AO14656 332 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 ARG1P05089 322 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 CTSDP07339 412 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-225ENST00000640900 SAA2P0DJI9 122 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-225ENST00000640900 HTR1DP28221 377 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 INPP1P49441 399 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 GNG10P50151 68 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 CCR6P51684 374 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 DYNLT3P51808 116 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 BRWD1-AS2P59051 145 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 HERV-K104P61576 105 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 DHODHQ02127 395 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 DIAPH2-AS1Q14236 149 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 RBMS2Q15434 407 aaKnown RBP7.36□□□□□ -1.23
SCARB2-225ENST00000640900 AANATQ16613 207 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 TPTE2P1Q5T6R2 138 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 GPR157Q5UAW9 335 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 LPCAT3Q6P1A2 487 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 C16orf87Q6PH81 154 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF818PQ6ZRF7 136 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 NRARPQ7Z6K4 114 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 LHFPL4Q7Z7J7 247 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 SLC38A6Q8IZM9 456 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 ZDHHC22Q8N966 263 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 C17orf50Q8WW18 174 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 RTN4IP1Q8WWV3 396 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-225ENST00000640900 DDB2Q92466 427 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 SLC5A7Q9GZV3 580 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 ALX4Q9H161 411 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-225ENST00000640900 OR2D2Q9H210 308 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 CCL28Q9NRJ3 127 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 MCUBQ9NWR8 336 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 COPZ2Q9P299 210 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF221Q9UK13 617 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 RNF150Q9ULK6 438 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 AMMECR1Q9Y4X0 333 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-225ENST00000640900 LINC00854A0A1B0GVQ3 168 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 GPR31O00270 319 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 TXNL1O43396 289 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 PGLYRP1O75594 196 aaPredicted RBP7.35□□□□□ -1.23
SCARB2-225ENST00000640900 PTTG1O95997 202 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 TCRBP04435 133 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 CT45A6P0DMU7 189 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 CT45A5P0DMU8 189 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 CT45A7P0DMV0 189 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 DUTP33316 252 aaKnown RBP7.35□□□□□ -1.23
SCARB2-225ENST00000640900 RAG2P55895 527 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 DEFA1P59665 94 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 DEFA3P59666 94 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 EBI3Q14213 229 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 OXA1LQ15070 435 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 SCGB2B2Q4G0G5 96 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 RPL39P5Q59GN2 51 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 RUSC1-AS1Q66K80 236 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 MZT2BQ6NZ67 158 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF66Q6ZN08 573 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 OR8H3Q8N146 312 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 LYG1Q8N1E2 194 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 POC5Q8NA72 575 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 OR5AN1Q8NGI8 311 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 OR10X1Q8NGY0 326 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 ZFAND1Q8TCF1 268 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 PIFOQ8TCI5 191 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 MARCH1Q8TCQ1 289 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 SECTM1Q8WVN6 248 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 CFHR4Q92496 578 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 TMEM230Q96A57 120 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 SCGB3A2Q96PL1 93 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 NABP2Q9BQ15 211 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 MARVELD1Q9BSK0 173 aa7.35□□□□□ -1.23
SCARB2-225ENST00000640900 GSX1Q9H4S2 264 aaPredicted RBP7.35□□□□□ -1.23
SCARB2-225ENST00000640900 FAM212BQ9NTI7 297 aaPredicted RBP7.35□□□□□ -1.23
SCARB2-225ENST00000640900 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
SCARB2-225ENST00000640900 IGHV1-3A0A0C4DH29 117 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 A0A0U1RQK1 487 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 LINC00473A8K010 186 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 HSD17B6O14756 317 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 GAPDHP04406 335 aaKnown RBP7.34□□□□□ -1.23
SCARB2-225ENST00000640900 IL3RAP26951 378 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 CEACAM3P40198 252 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 GPR12P47775 334 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 LINC00205P59089 165 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 FXYD4P59646 89 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 UBE2MP61081 183 aaKnown RBP7.34□□□□□ -1.23
SCARB2-225ENST00000640900 RPL30P62888 115 aaKnown RBP7.34□□□□□ -1.23
SCARB2-225ENST00000640900 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
SCARB2-225ENST00000640900 CLEC9AQ6UXN8 241 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 BRD3OSQ6XYD6 125 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 KCTD9Q7L273 389 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 SLC25A42Q86VD7 318 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 THNSL2Q86YJ6 484 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 PDZD9Q8IXQ8 264 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF383Q8NA42 475 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 GALNT14Q96FL9 552 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 ADTRPQ96IZ2 230 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 S1PR3Q99500 378 aa7.34□□□□□ -1.23
SCARB2-225ENST00000640900 HSD17B10Q99714 261 aaKnown RBP7.34□□□□□ -1.23
SCARB2-225ENST00000640900 MRPL20Q9BYC9 149 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms