RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 MEOX1P50221 254 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 SUB1P53999 127 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ERVFC1-1P60608 527 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 LCN2P80188 198 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ICAM4Q14773 271 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 CALHM1Q8IU99 346 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF524Q96C55 264 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 IMMP2LQ96T52 175 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 CHRDL1Q9BU40 450 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV1D-8A0A087WSZ0 117 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 FOXI3A8MTJ6 420 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 Q3ZCU0 254 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 INO80CQ6PI98 192 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 TIPARPQ7Z3E1 657 aaKnown RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CPEB3Q8NE35 698 aaKnown RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 HPSE2Q8WWQ2 592 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 TAF15Q92804 592 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 WBP1Q96G27 269 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CXXC4Q9H2H0 198 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 PRUNE2Q8WUY3 3088 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 IGSF23A1L1A6 192 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 NKX6-3A6NJ46 265 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 EFNA2O43921 213 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 TRGC2P03986 189 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 SRP19P09132 144 aaKnown RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 LYPD6Q86Y78 171 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF383Q8NA42 475 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 SARAFQ96BY9 339 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ADTRPQ96IZ2 230 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 OR6C3Q9NZP0 311 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 SLC45A2Q9UMX9 530 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 TGIF2-C20orf24A0A0A6YYL0 155 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 APOA2P02652 100 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 PHYHD1Q5SRE7 291 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 TGIF2LYQ8IUE0 185 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF665Q9H7R5 613 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 LRRC3CA6NJW4 275 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF716A6NP11 495 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ACAA1P09110 424 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CCL4P13236 92 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 NPBWR2P48146 333 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 PRSS12P56730 875 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 C1orf210Q8IVY1 113 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 DTD1Q8TEA8 209 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 R3HDM4Q96D70 268 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 SETD2Q9BYW2 2564 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 M0QZK8 103 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 GGCTO75223 188 aaKnown RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 TNFSF15O95150 251 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 OR2H2O95918 312 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 EDDM3BP56851 147 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 NMSQ5H8A3 153 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 GGNQ86UU5 652 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 POM121L2Q96KW2 1035 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF320A2RRD8 509 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ACTL6BO94805 426 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 KBTBD11O94819 623 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CD99P14209 185 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CNN1P51911 297 aaKnown RBP4.75□□□□□ -1.65
SCN3A-210ENST00000640652 MST1LQ2TV78 715 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 FAM90A9PA6NNJ1 464 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CDIPTO14735 213 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 UMODP07911 640 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 CTAG1AP78358 180 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 SLC23A3Q6PIS1 610 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 BTNL3Q6UXE8 466 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 VAMP8Q9BV40 100 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 PROCRQ9UNN8 238 aa4.75□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF891A8MT65 544 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 FAM162BQ5T6X4 162 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF497Q6ZNH5 498 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 CYP2G1PQ6ZSU1 146 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 SSC4DQ8WTU2 575 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 CD1BP29016 333 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 NPCDR1Q9BY65 106 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 WDR61Q9GZS3 305 aaKnown RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 EGLN1Q9GZT9 426 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 PROB1E7EW31 1015 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 KLF7O75840 302 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 ACP1P24666 158 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 S100A7P31151 101 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 UCP2P55851 309 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 C9orf152Q5JTZ5 239 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 C17orf78Q8N4C9 275 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 Q8WTZ3 238 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 SLC35E1Q96K37 410 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 PARD6GQ9BYG4 376 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-210ENST00000640652 FAM234AQ9H0X4 552 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 PSG11Q9UQ72 335 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 TRBV9A0A0B4J1U6 114 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 OR7C2O60412 319 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 HPRT1P00492 218 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 CLDN18P56856 261 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 UBE2G2P60604 165 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 TGIF1Q15583 401 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 OR1P1Q8NH06 330 aa4.74□□□□□ -1.65
SCN3A-210ENST00000640652 DLL3Q9NYJ7 618 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms