RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CEACAM6P40199 344 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
SMN2-216ENST00000638794 P2RY14Q15391 338 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 MED22Q15528 200 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 ACTBL2Q562R1 376 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 LIPKQ5VXJ0 399 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 PPP1R27Q86WC6 154 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
SMN2-216ENST00000638794 EDARADDQ8WWZ3 215 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 CLCC1Q96S66 551 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 GFI1Q99684 422 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 GHITMQ9H3K2 345 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
SMN2-216ENST00000638794 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
SMN2-216ENST00000638794 C3orf84H3BNL1 204 aa13□□□□□ -0.33
SMN2-216ENST00000638794 HSPA12AO43301 675 aa13□□□□□ -0.33
SMN2-216ENST00000638794 PROP1O75360 226 aa13□□□□□ -0.33
SMN2-216ENST00000638794 IGHV3-11P01762 117 aa13□□□□□ -0.33
SMN2-216ENST00000638794 ARSBP15848 533 aa13□□□□□ -0.33
SMN2-216ENST00000638794 ZBTB25P24278 435 aa13□□□□□ -0.33
SMN2-216ENST00000638794 PSG5Q15238 335 aa13□□□□□ -0.33
SMN2-216ENST00000638794 AKIRIN2Q53H80 203 aa13□□□□□ -0.33
SMN2-216ENST00000638794 ACSM6Q6P461 480 aa13□□□□□ -0.33
SMN2-216ENST00000638794 UNQ5815/PRO19632Q6UWF5 114 aa13□□□□□ -0.33
SMN2-216ENST00000638794 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
SMN2-216ENST00000638794 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
SMN2-216ENST00000638794 TMEM203Q969S6 136 aa13□□□□□ -0.33
SMN2-216ENST00000638794 MS4A10Q96PG2 267 aa13□□□□□ -0.33
SMN2-216ENST00000638794 RNF5Q99942 180 aa13□□□□□ -0.33
SMN2-216ENST00000638794 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
SMN2-216ENST00000638794 RNF150Q9ULK6 438 aa13□□□□□ -0.33
SMN2-216ENST00000638794 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
SMN2-216ENST00000638794 SLC17A2O00624 439 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 CA2P00918 260 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 IGKV1-16P04430 117 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 SCTP09683 121 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 GP9P14770 177 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 CPEP16870 476 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 LINC00205P59089 165 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 TMEM91Q6ZNR0 172 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 OR6Q1Q8NGQ2 317 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 UFD1Q92890 307 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 PTX4Q96A99 478 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 VCXQ9H320 206 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 Q9N2K0 584 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 HSF4Q9ULV5 492 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
SMN2-216ENST00000638794 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
SMN2-216ENST00000638794 OR8U9P0C7N5 309 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 FRMD6-AS1P0C7T7 363 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 TMEM50BP56557 158 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 TPPP2P59282 170 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 IRF3Q14653 427 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 ZNF383Q8NA42 475 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 SLA2Q9H6Q3 261 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
SMN2-216ENST00000638794 AK6Q9Y3D8 172 aaKnown RBP12.98□□□□□ -0.33
SMN2-216ENST00000638794 IGKV1-6A0A0C4DH72 117 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 SPDEFO95238 335 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 TFAP2AP05549 437 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 VEGFCP49767 419 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 CLDN12P56749 244 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 RPS16P62249 146 aaKnown RBP12.97□□□□□ -0.33
SMN2-216ENST00000638794 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
SMN2-216ENST00000638794 PITPNAQ00169 270 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 RAB11BQ15907 218 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
SMN2-216ENST00000638794 RHOVQ96L33 236 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
SMN2-216ENST00000638794 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
SMN2-216ENST00000638794 PECRQ9BY49 303 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 ZNF221Q9UK13 617 aa12.97□□□□□ -0.33
SMN2-216ENST00000638794 TRGV3P03979 118 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 HSMCR30P0CW71 290 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 CD40LGP29965 261 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 HAPLN4Q86UW8 402 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 OR4C12Q96R67 309 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 RDH8Q9NYR8 311 aa12.96□□□□□ -0.33
SMN2-216ENST00000638794 RYR2Q92736 4967 aa12.96□□□□□ -0.34
SMN2-216ENST00000638794 ARPC1BO15143 372 aaKnown RBP12.95□□□□□ -0.34
SMN2-216ENST00000638794 SLC25A17O43808 307 aa12.95□□□□□ -0.34
SMN2-216ENST00000638794 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
SMN2-216ENST00000638794 APOA2P02652 100 aa12.95□□□□□ -0.34
SMN2-216ENST00000638794 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
SMN2-216ENST00000638794 TPBGQ13641 420 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms