RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 LRRC29Q8WV35 223 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 PGLYRP3Q96LB9 341 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 A0A1W2PNR3 127 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 TCRBV5S1A1TA0A578 114 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 TSPOP30536 169 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 ZNF750Q32MQ0 723 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 RTN4RL1Q86UN2 441 aaPredicted RBP13.23□□□□□ -0.29
UBE3A-227ENST00000638011 PCDH15Q96QU1 1955 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 HOXD4P09016 255 aaPredicted RBP13.23□□□□□ -0.29
UBE3A-227ENST00000638011 TLNRD1Q9H1K6 362 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 TMEM56-RWDD3S4R434 201 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 KCNMB1Q16558 191 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 CT83Q5H943 113 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 C17orf47Q8NEP4 570 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 TNXAQ16473 311 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 LAMTOR2Q9Y2Q5 125 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 KCNE1BA0A087WTH5 132 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 ZGLP1P0C6A0 271 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 RAB1CQ92928 201 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
UBE3A-227ENST00000638011 TBL2Q9Y4P3 447 aaKnown RBP13.22□□□□□ -0.29
UBE3A-227ENST00000638011 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
UBE3A-227ENST00000638011 A0A0U1RQV5 110 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 CA6P23280 308 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 PLNP26678 52 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 DUSP2Q05923 314 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 LHFPL4Q7Z7J7 247 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 PRDM13Q9H4Q3 707 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 C7orf71A4D174 169 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 MVDP53602 400 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 GVQW1Q8N7I0 195 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 PLPP3O14495 311 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 NRSN2Q9GZP1 204 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 MED19A0JLT2 244 aaPredicted RBP13.22□□□□□ -0.29
UBE3A-227ENST00000638011 PLA2G10O15496 165 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 IL11RAQ14626 422 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
UBE3A-227ENST00000638011 TSPO2Q5TGU0 170 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 ZNF714Q96N38 554 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 PDFQ9HBH1 243 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 MBD1Q9UIS9 605 aaPredicted RBP13.21□□□□□ -0.29
UBE3A-227ENST00000638011 HIST1H2BAQ96A08 127 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 TRAV30A0A087WSZ9 112 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 HDHD3Q9BSH5 251 aaPredicted RBP13.21□□□□□ -0.29
UBE3A-227ENST00000638011 LOC285556D6RIA3 1793 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 SF3B5Q9BWJ5 86 aaKnown RBP13.21□□□□□ -0.29
UBE3A-227ENST00000638011 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.29
UBE3A-227ENST00000638011 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 FFAR1O14842 300 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 SIRT5Q9NXA8 310 aa13.21□□□□□ -0.29
UBE3A-227ENST00000638011 SLURP2P0DP57 97 aa13.21□□□□□ -0.3
UBE3A-227ENST00000638011 PNKDQ8N490 385 aa13.21□□□□□ -0.3
UBE3A-227ENST00000638011 THAP10Q9P2Z0 257 aaPredicted RBP13.21□□□□□ -0.3
UBE3A-227ENST00000638011 SRSF6Q13247 344 aaKnown RBP13.21□□□□□ -0.3
UBE3A-227ENST00000638011 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.3
UBE3A-227ENST00000638011 MC5RP33032 325 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 B4GALNT1Q00973 533 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 TM4SF19Q96DZ7 209 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 CXCL2P19875 107 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 TM4SF20Q53R12 229 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 OR8B12Q8NGG6 310 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 OR1K1Q8NGR3 316 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 MUC4Q99102 2169 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 HLA-DQB1P01920 261 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 GGTLC2Q14390 218 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 VKORC1L1Q8N0U8 176 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 ASB10Q8WXI3 467 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 CRISPLD2Q9H0B8 497 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 INSIG2Q9Y5U4 225 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 CD8AP01732 235 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FSTP19883 344 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 TMEM249Q2WGJ8 235 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 NR2C2APQ86WQ0 139 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 TBC1D29Q9UFV1 150 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A10PA6NDY2 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A18PA6NE21 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A16PA6NEW6 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A20PA6NIJ5 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A8PA6NJQ4 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A7PA6NKC0 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A22PA8MWA6 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A12PA8MX19 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A5PA8MXJ8 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A23PA8MXZ1 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 K7N7A8 449 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A15PP0C7V4 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A13PP0C7W8 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A14PP0C7W9 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 FAM90A24PP0C7X0 464 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
UBE3A-227ENST00000638011 RAE1P78406 368 aaKnown RBP13.2□□□□□ -0.3
UBE3A-227ENST00000638011 SLC25A2Q9BXI2 301 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms