RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-249ENST00000637777 PKD1L1Q8TDX9 2849 aa11.41□□□□□ -0.58
CACNA1A-249ENST00000637777 NUDT19A8MXV4 375 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 IGHG2P01859 326 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 FCER2P06734 321 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 CT45A6P0DMU7 189 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 CT45A5P0DMU8 189 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 CT45A7P0DMV0 189 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 VDAC1P21796 283 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 CNTFRP26992 372 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 MC5RP33032 325 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 ARPC4P59998 168 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 NCS1P62166 190 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 ZNF260Q3ZCT1 412 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 UBE2NLQ5JXB2 153 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 STPG2Q8N412 459 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 SAMD12Q8N8I0 201 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 SLC25A38Q96DW6 304 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 S100A16Q96FQ6 103 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 GON7Q9BXV9 100 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 MRPS26Q9BYN8 205 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 PARP11Q9NR21 331 aa11.4□□□□□ -0.58
CACNA1A-249ENST00000637777 TRBV6-7A0A0A0MS04 114 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 A0A0A6YYH2 397 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 A6NJ64 397 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 H0YJW9 148 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 TMEM127O75204 238 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 SMIM18P0DKX4 95 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 FAM71E2Q8N5Q1 922 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 OR13F1Q8NGS4 319 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 AGMATQ9BSE5 352 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 DCSTAMPQ9H295 470 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 IFT46Q9NQC8 304 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 PLSCR3Q9NRY6 295 aa11.39□□□□□ -0.59
CACNA1A-249ENST00000637777 IGKV1D-8A0A087WSZ0 117 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 TRIM64CA6NLI5 447 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 LINC01548A6NM66 108 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 DIRAS3O95661 229 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 CTXN2P0C2S0 81 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 CD83Q01151 205 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 TMEM69Q5SWH9 247 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 Q6ZS49 121 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 GPR141Q7Z602 305 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 WIPF2Q8TF74 440 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 RITA1Q96K30 269 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 COMMD3Q9UBI1 195 aa11.38□□□□□ -0.59
CACNA1A-249ENST00000637777 MEIS3P1A6NDR6 274 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 RBBP9O75884 186 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 CD33P20138 364 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 NFYAP23511 347 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 LUMP51884 338 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 CXorf66Q5JRM2 361 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 GPR107Q5VW38 600 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 LIN54Q6MZP7 749 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 TEX38Q6PEX7 206 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 CNIH2Q6PI25 160 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 C1QL4Q86Z23 238 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 COMMD1Q8N668 190 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 BEST4Q8NFU0 473 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 SLC25A46Q96AG3 418 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 FLYWCH2Q96CP2 140 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 TSNAXQ99598 290 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 SDHAF2Q9NX18 166 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 ANXA10Q9UJ72 324 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
CACNA1A-249ENST00000637777 SMIM31A0A1B0GVY4 71 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 RRHO14718 337 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 SSX5O60225 188 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 OR5H8P0DN80 308 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 PTHLHP12272 177 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 LINC00205P59089 165 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 ECSCRQ19T08 205 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 TCTEX1D4Q5JR98 221 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 PDPNQ86YL7 162 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 H1FOOQ8IZA3 346 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 ZNF383Q8NA42 475 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 KLHL30-AS1Q8NEE0 82 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 OR5AN1Q8NGI8 311 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 AUNIPQ9H7T9 357 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 METTL1Q9UBP6 276 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 MRPS7Q9Y2R9 242 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 WSB1Q9Y6I7 421 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 VWFP04275 2813 aa11.36□□□□□ -0.59
CACNA1A-249ENST00000637777 ATP6V0E1O15342 81 aa11.35□□□□□ -0.59
CACNA1A-249ENST00000637777 XRCC3O43542 346 aa11.35□□□□□ -0.59
CACNA1A-249ENST00000637777 TUSC2O75896 110 aa11.35□□□□□ -0.59
CACNA1A-249ENST00000637777 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
CACNA1A-249ENST00000637777 CBX5P45973 191 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms