RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ODF3L1Q8IXM7 274 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 H1FOOQ8IZA3 346 aaPredicted RBP6.57□□□□□ -1.36
PNKP-226ENST00000636840 Q8N2B8 174 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 OR5AP2Q8NGF4 316 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 SGMS2Q8NHU3 365 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 ISOC1Q96CN7 298 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 CYYR1Q96J86 154 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 GON7Q9BXV9 100 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 CCDC59Q9P031 241 aaKnown RBP6.57□□□□□ -1.36
PNKP-226ENST00000636840 WASHC3Q9Y3C0 194 aa6.57□□□□□ -1.36
PNKP-226ENST00000636840 H3BMQ9 156 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 J3QRK9 145 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 ZNF701M0R085 212 aaPredicted RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 M0R1X1 148 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 KCNAB3O43448 404 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 HLA-DQB1P01920 261 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 CT45A6P0DMU7 189 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 CT45A5P0DMU8 189 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 CT45A7P0DMV0 189 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 NFYAP23511 347 aaPredicted RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 FCGR2CP31995 323 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 LGALS7P47929 136 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 THBS3P49746 956 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 PROK1P58294 105 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 ACTBP60709 375 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 TSPAN5P62079 268 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 RPS16P62249 146 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 SLC35B1P78383 322 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 MRPS10P82664 201 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 HERPUD1Q15011 391 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 PLGLAQ15195 96 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 MMDQ15546 238 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 RTL8BQ17RB0 113 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 RPL39P5Q59GN2 51 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 TMEM17Q86X19 198 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 SNX29P2Q8IUI4 249 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 FOXRED2Q8IWF2 684 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 GVQW1Q8N7I0 195 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 ZBTB34Q8NCN2 500 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 OR5H2Q8NGV7 314 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 DYNC2LI1Q8TCX1 351 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 GIMAP1Q8WWP7 306 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 FCAMRQ8WWV6 532 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 TAF15Q92804 592 aaKnown RBP eCLIP6.56□□□□□ -1.36
PNKP-226ENST00000636840 FLYWCH2Q96CP2 140 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 DIRAS2Q96HU8 199 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 TSNAXQ99598 290 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 MRPL20Q9BYC9 149 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 C6orf62Q9GZU0 229 aaPredicted RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 OR2D2Q9H210 308 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 IFI27L2Q9H2X8 130 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 ZNF702PQ9H963 129 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 SLC35D1Q9NTN3 355 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 LIN7CQ9NUP9 197 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 EXTL2Q9UBQ6 330 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 RSL24D1Q9UHA3 163 aaKnown RBP6.56□□□□□ -1.36
PNKP-226ENST00000636840 PRELID3BQ9Y3B1 194 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 CEPT1Q9Y6K0 416 aa6.56□□□□□ -1.36
PNKP-226ENST00000636840 IGKV1D-8A0A087WSZ0 117 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 MEIS3P1A6NDR6 274 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 ZNF736B4DX44 427 aaPredicted RBP6.55□□□□□ -1.36
PNKP-226ENST00000636840 M0QZ24 198 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 CTDSP2O14595 271 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 NBR2O15453 112 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 IFNA6P05013 189 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 PTHLHP12272 177 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 S100GP29377 79 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 S100A5P33763 92 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 RCVRNP35243 200 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 HERV-K104P61576 105 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 ACTBL2Q562R1 376 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 LIN54Q6MZP7 749 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 LPCAT3Q6P1A2 487 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 FAM131AQ6UXB0 335 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 SLC35E3Q7Z769 313 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 PDPNQ86YL7 162 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 KLHDC1Q8N7A1 406 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 ZNF645Q8N7E2 425 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 C5orf56Q8N8D9 126 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 OR5AN1Q8NGI8 311 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 OR6F1Q8NGZ6 308 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 MCFD2Q8NI22 146 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 GPX8Q8TED1 209 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 CHPT1Q8WUD6 406 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 WFDC12Q8WWY7 111 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 DGCR14Q96DF8 476 aaKnown RBP6.55□□□□□ -1.36
PNKP-226ENST00000636840 AIFM2Q9BRQ8 373 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 PARP12Q9H0J9 701 aaKnown RBP6.55□□□□□ -1.36
PNKP-226ENST00000636840 MMP27Q9H306 513 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 SDHAF2Q9NX18 166 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 EHFQ9NZC4 300 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 SIGLEC9Q9Y336 463 aa6.55□□□□□ -1.36
PNKP-226ENST00000636840 FABP12A6NFH5 140 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 H0YJW9 148 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 AP4M1O00189 453 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 TUSC2O75896 110 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 IGHG2P01859 326 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 FCER2P06734 321 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 NAT1P18440 290 aa6.54□□□□□ -1.36
PNKP-226ENST00000636840 SSBP1Q04837 148 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms