RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CIARTQ8N365 385 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 NPWQ8N729 165 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RBMXL3Q8N7X1 1067 aaKnown RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 OR8B12Q8NGG6 310 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 JOSD2Q8TAC2 188 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF689Q96CS4 500 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 C18orf12Q96KH6 178 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CHST6Q9GZX3 395 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RLFQ13129 1914 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 TRAV26-2A0A0B4J265 109 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 IGKV1D-13A0A0B4J2D9 117 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 LOC100130705A0A1B0GUX0 176 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 DUXBA0A1W2PPF3 345 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 TMEM218A2RU14 115 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 GAGE12JA6NER3 117 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 C9JAW5 83 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 K7ENP7 123 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RBFOX2O43251 390 aaKnown RBP eCLIP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 SNAP91O60641 907 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 UPK1BO75841 260 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 OR2A4O95047 310 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 OR4A8P0C604 315 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 IGKV1-13P0DP09 117 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 HLA-DOBP13765 273 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RAB3BP20337 219 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CASP1P29466 404 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RPS25P62851 125 aaKnown RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF763Q0D2J5 394 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF266Q14584 549 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 TTC32Q5I0X7 151 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CROCCP2Q86T23 111 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 OSR1Q8TAX0 266 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 STARD4Q96DR4 205 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 OR2A7Q96R45 310 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 TRIB3Q96RU7 358 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 PRTFDC1Q9NRG1 225 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RBFOX1Q9NWB1 397 aaKnown RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 KCNIP1Q9NZI2 227 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 SNX12Q9UMY4 172 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 HIGD1AQ9Y241 93 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RNF114Q9Y508 228 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 ORC6Q9Y5N6 252 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
SDCBP-213ENST00000630925 DNAH12Q6ZR08 3092 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 TRAV38-1A0A0B4J264 116 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 CCL15-CCL14A0A0B4J2E2 113 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 A0A0G2JN53 185 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF354AO60765 605 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-213ENST00000630925 GAGE7O76087 117 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 IGHV3-9P01782 118 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 AMBPP02760 352 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 SERPINE1P05121 402 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 GAGE12FP0CL80 117 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 GAGE12GP0CL81 117 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 GAGE12IP0CL82 117 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 SPNP16150 400 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 CMPK1P30085 196 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 MTPNP58546 118 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF155Q12901 538 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-213ENST00000630925 GAGE4Q13068 117 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 C1DQ13901 141 aaKnown RBP3.87□□□□□ -1.79
SDCBP-213ENST00000630925 CCL15Q16663 113 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 MESTQ5EB52 335 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 NHLRC3Q5JS37 347 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 IBA57Q5T440 356 aaKnown RBP3.87□□□□□ -1.79
SDCBP-213ENST00000630925 C11orf53Q8IXP5 236 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 FTMTQ8N4E7 242 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 SYT8Q8NBV8 401 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 FNDC9Q8TBE3 224 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 C9orf85Q96MD7 179 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 LRRC61Q9BV99 259 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 OR2H1Q9GZK4 316 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 WDR13Q9H1Z4 485 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 OR2D2Q9H210 308 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 EFCAB1Q9HAE3 211 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 TBX21Q9UL17 535 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 SELENOKQ9Y6D0 94 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 KCNE3Q9Y6H6 103 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 PLXND1Q9Y4D7 1925 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 FAM208BQ5VWN6 2430 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
SDCBP-213ENST00000630925 IGHV1OR21-1A0A087WYE8 117 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 TRAV8-2A0A0B4J237 113 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 TRBV5-4A0A0C4DH59 114 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 M0R2Z0 102 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 DNASE2O00115 360 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 MGAMO43451 1857 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 RAMP2O60895 175 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PDCD6O75340 191 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 LALBAP00709 142 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 IGLV1-40P01703 118 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 FABP3P05413 133 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SNRPCP09234 159 aaKnown RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 MMP7P09237 267 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SCTP09683 121 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 RPL34P49207 117 aaKnown RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 DEFA1P59665 94 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 HERV-K104P61576 105 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms