RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 PARP11Q9NR21 331 aa12.51□□□□□ -0.41
CHRNA4-211ENST00000628606 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
CHRNA4-211ENST00000628606 ZNF580Q9UK33 172 aa12.51□□□□□ -0.41
CHRNA4-211ENST00000628606 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
CHRNA4-211ENST00000628606 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
CHRNA4-211ENST00000628606 RBM7Q9Y580 266 aaKnown RBP12.51□□□□□ -0.41
CHRNA4-211ENST00000628606 MFNGO00587 321 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 SCGNO76038 276 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 APOA2P02652 100 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 RPLP1P05386 114 aaKnown RBP12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 THBS3P49746 956 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 NEDD8Q15843 81 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 DPF1Q92782 380 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 RNF5Q99942 180 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 MCRIP2Q9BUT9 160 aaKnown RBP12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 OR51J1Q9H342 316 aa12.5□□□□□ -0.41
CHRNA4-211ENST00000628606 IGKV1-6A0A0C4DH72 117 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 LOC100506127A0A0U1RQW1 187 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 H0YJW9 148 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 RRHO14718 337 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 NDUFA3O95167 84 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 DIRAS3O95661 229 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 IGHG4P01861 327 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 TFAP2AP05549 437 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 GSTT2BP0CG30 244 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 CDNFQ49AH0 187 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 KCTD21Q4G0X4 260 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 C18orf65Q6ZTR6 163 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 NR2C2APQ86WQ0 139 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 MRPL41Q8IXM3 137 aaKnown RBP12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 LINC00482Q8N8I6 264 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 DRAXINQ8NBI3 349 aaPredicted RBP12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 TSNAXQ99598 290 aaKnown RBP12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 OR51E2Q9H255 320 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 WSB1Q9Y6I7 421 aa12.49□□□□□ -0.41
CHRNA4-211ENST00000628606 IGHV7-81A0A0B4J1V7 117 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 M0R1X1 148 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 ATP6V0E1O15342 81 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 OR8U9P0C7N5 309 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 CD36P16671 472 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 SDC2P34741 201 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 RAB25P57735 213 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 MXD1Q05195 221 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 CBX3Q13185 183 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 RNF152Q8N8N0 203 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 OR8U1Q8NH10 309 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 MAFIPQ8WZ33 124 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 TOLLIPQ9H0E2 274 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 OR2D2Q9H210 308 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 VCX3AQ9NNX9 186 aa12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 ZNF230Q9UIE0 474 aaPredicted RBP12.48□□□□□ -0.41
CHRNA4-211ENST00000628606 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 TRAV41A0A0B4J266 112 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 CCL24O00175 119 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 SNRPBP14678 240 aaKnown RBP12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 DTYMKP23919 212 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 PITPNAQ00169 270 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 CFHR3Q02985 330 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 TMEM267Q0VDI3 215 aaPredicted RBP12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 TIMM50Q3ZCQ8 353 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 PDPNQ86YL7 162 aa12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
CHRNA4-211ENST00000628606 G3V318 75 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 PSMB8P28062 276 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 TAGLNQ01995 201 aaKnown RBP12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 ECSCRQ19T08 205 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 IDNKQ5T6J7 187 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 HACD4Q5VWC8 232 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 Q6ZS49 121 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 RAX2Q96IS3 184 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 DUX3Q96PT4 197 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 ST6GALNAC5Q9BVH7 336 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 SLC35D1Q9NTN3 355 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 AURKAIP1Q9NWT8 199 aaPredicted RBP12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 METTL1Q9UBP6 276 aaKnown RBP12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 ZMAT5Q9UDW3 170 aaKnown RBP12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 GAB2Q9UQC2 676 aa12.46□□□□□ -0.41
CHRNA4-211ENST00000628606 SPDEFO95238 335 aa12.45□□□□□ -0.42
CHRNA4-211ENST00000628606 CTXN2P0C2S0 81 aa12.45□□□□□ -0.42
CHRNA4-211ENST00000628606 CD40LGP29965 261 aa12.45□□□□□ -0.42
CHRNA4-211ENST00000628606 SCAND1P57086 179 aa12.45□□□□□ -0.42
CHRNA4-211ENST00000628606 GNG2P59768 71 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms