RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SP6Q3SY56 376 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 OR5C1Q8NGR4 320 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 RPRMQ9NS64 109 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 MTFP1Q9UDX5 166 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 MRM2Q9UI43 246 aaKnown RBP9.5□□□□□ -0.89
VPS8-227ENST00000625842 A0A1W2PPE3 182 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 SLC35E4Q6ICL7 350 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 ALKAL2Q6UX46 152 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 LINC01587Q99440 93 aa9.5□□□□□ -0.89
VPS8-227ENST00000625842 KBTBD11O94819 623 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 IL6RP08887 468 aaPredicted RBP9.49□□□□□ -0.89
VPS8-227ENST00000625842 MINOS1Q5TGZ0 78 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 SLC25A32Q9H2D1 315 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 CRIM1Q9NZV1 1036 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 MINOS1-NBL1R4GNA1 71 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 TRAV40A0A0B4J280 105 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 TIAF1O95411 115 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 CXorf1O96002 111 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 MAGEB1P43366 347 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 HERPUD1Q15011 391 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 SGMS2Q8NHU3 365 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 AKIRIN1Q9H9L7 192 aaPredicted RBP9.49□□□□□ -0.89
VPS8-227ENST00000625842 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 MFNGO00587 321 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 NDUFB6O95139 128 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 OR5AC1P0C628 307 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 NHLH2Q02577 135 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 LRRTM1Q86UE6 522 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 CLRN3Q8NCR9 226 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 NEURL2Q9BR09 285 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 TXNDC17Q9BRA2 123 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
VPS8-227ENST00000625842 RP1P56715 2156 aa9.49□□□□□ -0.89
VPS8-227ENST00000625842 TMEM189A5PLL7 270 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 C1QTNF9BB2RNN3 333 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 C1QTNF9P0C862 333 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 PTHLHP12272 177 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 PAX1P15863 534 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 WNT5AP41221 380 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 MESP2Q0VG99 397 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 TMEM52Q8NDY8 209 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 TMEM158Q8WZ71 300 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 CHCHD2Q9Y6H1 151 aaPredicted RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 ATG2BQ96BY7 2078 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 RREB1Q92766 1687 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 APELAP0DMC3 54 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 ARL2-SNX15V9GYD0 113 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 IGKV1D-33P01593 117 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 IGKV1-33P01594 117 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 ZP1P60852 638 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 HIST1H1AQ02539 215 aaPredicted RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 FCN2Q15485 313 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 ZNF362Q5T0B9 420 aaPredicted RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 TEX38Q6PEX7 206 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
VPS8-227ENST00000625842 CTAG2O75638 210 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 OR10C1Q96KK4 312 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 SEMA5BQ9P283 1151 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 AKAP6Q13023 2319 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 A0A1B0GUL6 1792 aa9.48□□□□□ -0.89
VPS8-227ENST00000625842 GREM1O60565 184 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 IGKV3-11P04433 115 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 P2RY1P47900 373 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 CLDN18P56856 261 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 C21orf62Q9NYP8 219 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 FOSL1P15407 271 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 CD69Q07108 199 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 HCP5Q6MZN7 132 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 NTN1O95631 604 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SMIM10L1P0DMW3 83 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 UCP3P55916 312 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 LSAMPQ13449 338 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 CELF2-AS1Q8N7Q2 184 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 DRAXINQ8NBI3 349 aaPredicted RBP9.47□□□□□ -0.89
VPS8-227ENST00000625842 SMIM10Q96HG1 83 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SRXN1Q9BYN0 137 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SULT1A2P50226 295 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SPINK9Q5DT21 86 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 SLC2A9Q9NRM0 540 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
VPS8-227ENST00000625842 ZNF638Q14966 1978 aaKnown RBP9.47□□□□□ -0.89
VPS8-227ENST00000625842 IGKV3D-15A0A087WSY6 115 aa9.46□□□□□ -0.89
VPS8-227ENST00000625842 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.89
VPS8-227ENST00000625842 SIX6O95475 246 aa9.46□□□□□ -0.89
VPS8-227ENST00000625842 IGKV3-15P01624 115 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms