RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
PNKP-218ENST00000625299 SLC23A1Q9UHI7 598 aa11.13□□□□□ -0.63
PNKP-218ENST00000625299 GPX5O75715 221 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 GLAP06280 429 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 CD7P09564 240 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
PNKP-218ENST00000625299 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
PNKP-218ENST00000625299 BVESQ8NE79 360 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 SETD6Q8TBK2 473 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 GHSRQ92847 366 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 SMIM19Q96E16 107 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
PNKP-218ENST00000625299 LRRC42Q9Y546 428 aa11.12□□□□□ -0.63
PNKP-218ENST00000625299 CXorf65A6NEN9 183 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 H3BNX3 289 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 ETV1P50549 477 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 ALDH3A2P51648 485 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
PNKP-218ENST00000625299 TMPRSS11AQ6ZMR5 421 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 OR5AN1Q8NGI8 311 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 DYNLRB2Q8TF09 96 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 RNF5Q99942 180 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 SULT4A1Q9BR01 284 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 ST6GALNAC5Q9BVH7 336 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 CHMP1AQ9HD42 196 aaPredicted RBP11.11□□□□□ -0.63
PNKP-218ENST00000625299 COA4Q9NYJ1 87 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 SIGLEC8Q9NYZ4 499 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 PEMTQ9UBM1 199 aa11.11□□□□□ -0.63
PNKP-218ENST00000625299 RPL36Q9Y3U8 105 aaKnown RBP11.11□□□□□ -0.63
PNKP-218ENST00000625299 KMT2AQ03164 3969 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 OR2A4O95047 310 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 SPDEFO95238 335 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 APELAP0DMC3 54 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 AADACP22760 399 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 LGALS7P47929 136 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 LINC00205P59089 165 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 GUCA2BQ16661 112 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 Q499Y3 187 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 ZFP41Q8N8Y5 198 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 PYDC1Q8WXC3 89 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 NEDD4LQ96PU5 975 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 OR14A2Q96R54 314 aa11.1□□□□□ -0.63
PNKP-218ENST00000625299 PCLOQ9Y6V0 5065 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 A0A0B4J203 849 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 LALBAP00709 142 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 CAPGP40121 348 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 ZNF343Q6P1L6 599 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 SVOPQ8N4V2 548 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 RHOXF1Q8NHV9 184 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 PHB2Q99623 299 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 FAAP24Q9BTP7 215 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 TINAGL1Q9GZM7 467 aaPredicted RBP11.09□□□□□ -0.63
PNKP-218ENST00000625299 BABAM2Q9NXR7 383 aa11.09□□□□□ -0.63
PNKP-218ENST00000625299 PNMA8CA0A1B0GUJ8 204 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 OGG1O15527 345 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 APOA2P02652 100 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 SSBP2P81877 361 aaPredicted RBP11.08□□□□□ -0.64
PNKP-218ENST00000625299 PJVKQ0ZLH3 352 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 YIF1BQ5BJH7 314 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 C6orf201Q7Z4U5 140 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 LAX1Q8IWV1 398 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 CBR4Q8N4T8 237 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 ZNF383Q8NA42 475 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 C11orf54Q9H0W9 315 aaPredicted RBP11.08□□□□□ -0.64
PNKP-218ENST00000625299 MRPS18AQ9NVS2 196 aaKnown RBP11.08□□□□□ -0.64
PNKP-218ENST00000625299 OR1A1Q9P1Q5 309 aa11.08□□□□□ -0.64
PNKP-218ENST00000625299 ZNF785A8K8V0 405 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 CEACAM6P40199 344 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 MECP2P51608 486 aaKnown RBP11.07□□□□□ -0.64
PNKP-218ENST00000625299 RPS11P62280 158 aaKnown RBP eCLIP11.07□□□□□ -0.64
PNKP-218ENST00000625299 SMN1Q16637 294 aaKnown RBP11.07□□□□□ -0.64
PNKP-218ENST00000625299 PDPNQ86YL7 162 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 RPP25LQ8N5L8 163 aaKnown RBP11.07□□□□□ -0.64
PNKP-218ENST00000625299 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 FGF20Q9NP95 211 aaPredicted RBP11.07□□□□□ -0.64
PNKP-218ENST00000625299 FAM53CQ9NYF3 392 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 SELENOKQ9Y6D0 94 aa11.07□□□□□ -0.64
PNKP-218ENST00000625299 DNAH10Q8IVF4 4471 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 TRBV5-7A0A0A0MS05 114 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 NUPR2A6NF83 97 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 DYNC1I1O14576 645 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 AIREO43918 545 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 RBMXL2O75526 392 aaKnown RBP11.06□□□□□ -0.64
PNKP-218ENST00000625299 CIB2O75838 187 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 MYL12AP19105 171 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 OR10K2Q6IF99 312 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 CDH26Q8IXH8 852 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 EDARADDQ8WWZ3 215 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 WDR89Q96FK6 387 aaPredicted RBP11.06□□□□□ -0.64
PNKP-218ENST00000625299 TMEM68Q96MH6 324 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 SLC35D1Q9NTN3 355 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 CLEC2DQ9UHP7 191 aa11.06□□□□□ -0.64
PNKP-218ENST00000625299 ZNF221Q9UK13 617 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms