RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
DDB2-216ENST00000622878 LIN54Q6MZP7 749 aa12.48□□□□□ -0.41
DDB2-216ENST00000622878 OR4A4PQ8NGN8 299 aa12.48□□□□□ -0.41
DDB2-216ENST00000622878 OR10R2Q8NGX6 335 aa12.48□□□□□ -0.41
DDB2-216ENST00000622878 YTHDF1Q9BYJ9 559 aaKnown RBP12.48□□□□□ -0.41
DDB2-216ENST00000622878 WSB1Q9Y6I7 421 aa12.48□□□□□ -0.41
DDB2-216ENST00000622878 A0A0B4J203 849 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 RRHO14718 337 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 FCGR3AP08637 254 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
DDB2-216ENST00000622878 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
DDB2-216ENST00000622878 CRIP2P52943 208 aaPredicted RBP12.47□□□□□ -0.41
DDB2-216ENST00000622878 LINC00205P59089 165 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 NDPQ00604 133 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 DEFB136Q30KP8 78 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 GPR61Q9BZJ8 451 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 KLK15Q9H2R5 256 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 TXNL4BQ9NX01 149 aaKnown RBP12.47□□□□□ -0.41
DDB2-216ENST00000622878 RDH8Q9NYR8 311 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 KIAA1456Q9P272 454 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 WASHC3Q9Y3C0 194 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 FBXO7Q9Y3I1 522 aa12.47□□□□□ -0.41
DDB2-216ENST00000622878 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 WI2-2373I1.2A0A1W2PRP0 233 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 FCN1O00602 326 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 FABP7O15540 132 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 RBBP9O75884 186 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 CD3GP09693 182 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 SNRPBP14678 240 aaKnown RBP12.46□□□□□ -0.41
DDB2-216ENST00000622878 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.41
DDB2-216ENST00000622878 GNB3P16520 340 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 FHL3Q13643 280 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 ZNF383Q8NA42 475 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 DRAXINQ8NBI3 349 aaPredicted RBP12.46□□□□□ -0.41
DDB2-216ENST00000622878 OR8U1Q8NH10 309 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 RNF5Q99942 180 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 CABLES2Q9BTV7 478 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 MCRIP2Q9BUT9 160 aaKnown RBP12.46□□□□□ -0.41
DDB2-216ENST00000622878 FBXL15Q9H469 300 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
DDB2-216ENST00000622878 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 DIRAS3O95661 229 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 IGKV1-16P04430 117 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 GSTT2P0CG29 244 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 GSTT2BP0CG30 244 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
DDB2-216ENST00000622878 GADD45AP24522 165 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 PSMB9P28065 219 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 SERPINB10P48595 397 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 CX3CL1P78423 397 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 IGSF11Q5DX21 431 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 ZNF660Q6AZW8 331 aaPredicted RBP12.45□□□□□ -0.42
DDB2-216ENST00000622878 Q6ZS49 121 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 FCGR1BQ92637 280 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 Q9H521 79 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 STUB1Q9UNE7 303 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
DDB2-216ENST00000622878 SMIM30A4D0T7 59 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 H7C2Y5 167 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 I3L521 148 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 SOX15O60248 233 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 RUNX1Q01196 453 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 PSG5Q15238 335 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 SRSF7Q16629 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDB2-216ENST00000622878 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.44□□□□□ -0.42
DDB2-216ENST00000622878 GNB4Q9HAV0 340 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDB2-216ENST00000622878 ZNF230Q9UIE0 474 aaPredicted RBP12.44□□□□□ -0.42
DDB2-216ENST00000622878 ZNF221Q9UK13 617 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 ELF5Q9UKW6 265 aaPredicted RBP12.44□□□□□ -0.42
DDB2-216ENST00000622878 NUBP2Q9Y5Y2 271 aa12.44□□□□□ -0.42
DDB2-216ENST00000622878 A0A075B6Q4 140 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 NOTOA8MTQ0 251 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 TFAP2AP05549 437 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 GSTP1P09211 210 aaKnown RBP12.43□□□□□ -0.42
DDB2-216ENST00000622878 RAB9AP51151 201 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 MRPS15P82914 257 aaKnown RBP12.43□□□□□ -0.42
DDB2-216ENST00000622878 ZNF773Q6PK81 442 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 TPRA1Q86W33 373 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 PDPNQ86YL7 162 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 MAFIPQ8WZ33 124 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 C5orf30Q96GV9 206 aa12.43□□□□□ -0.42
DDB2-216ENST00000622878 IGKV1D-8A0A087WSZ0 117 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 BET1O15155 118 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 SPDEFO95238 335 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 OR8U9P0C7N5 309 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 ZNF562Q6V9R5 426 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 OR11H1Q8NG94 326 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 OR5M8Q8NGP6 311 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 OR10J5Q8NHC4 309 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 DPF1Q92782 380 aa12.42□□□□□ -0.42
DDB2-216ENST00000622878 ATG5Q9H1Y0 275 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms