RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 LINC00205P59089 165 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 TMEM267Q0VDI3 215 aaPredicted RBP8.36□□□□□ -1.07
LINC00963-214ENST00000622680 PSG5Q15238 335 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 AKIRIN2Q53H80 203 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 TTC23Q5W5X9 447 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 PACRGLQ8N7B6 248 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 FAAP24Q9BTP7 215 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 VCX3BQ9H321 246 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 SLA2Q9H6Q3 261 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 C8orf4Q9NR00 106 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 PIPOXQ9P0Z9 390 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 ABRACLQ9P1F3 81 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 OR1A1Q9P1Q5 309 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 RNF150Q9ULK6 438 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 IZUMO1RA6ND01 250 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 SLC25A17O43808 307 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 TRBV12-3P01733 135 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 SYNJ2BPP57105 145 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 SSBP2P81877 361 aaPredicted RBP8.35□□□□□ -1.07
LINC00963-214ENST00000622680 INSL4Q14641 139 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 OGFRL1Q5TC84 451 aaPredicted RBP8.35□□□□□ -1.07
LINC00963-214ENST00000622680 NKAIN3Q8N8D7 197 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 POC5Q8NA72 575 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 OR5T1Q8NG75 326 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 TMEM80Q96HE8 168 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 NEDD4LQ96PU5 975 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 HDHD3Q9BSH5 251 aaPredicted RBP8.35□□□□□ -1.07
LINC00963-214ENST00000622680 THAP7Q9BT49 309 aaPredicted RBP8.35□□□□□ -1.07
LINC00963-214ENST00000622680 TMED9Q9BVK6 235 aa8.35□□□□□ -1.07
LINC00963-214ENST00000622680 CHMP1AQ9HD42 196 aaPredicted RBP8.35□□□□□ -1.07
LINC00963-214ENST00000622680 A0A0A6YYD4 124 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 C13orf42A0A1B0GVH6 325 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 IRGMA1A4Y4 181 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 RBBP9O75884 186 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 ATP6V1G2O95670 118 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 NAPSAO96009 420 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 CPEP16870 476 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 CELP19835 753 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 HTR2CP28335 458 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 CD40LGP29965 261 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 RPS27AP62979 156 aaKnown RBP8.34□□□□□ -1.07
LINC00963-214ENST00000622680 PJVKQ0ZLH3 352 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 UNC119Q13432 240 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 FXYD3Q14802 87 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 ZNF880Q6PDB4 577 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 IL34Q6ZMJ4 242 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 CDH26Q8IXH8 852 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 ZNF383Q8NA42 475 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 SETD9Q8NE22 299 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 OR5AN1Q8NGI8 311 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 OR9G4Q8NGQ1 327 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 UQCC2Q9BRT2 126 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 AGMATQ9BSE5 352 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 TMEM59Q9BXS4 323 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 C11orf54Q9H0W9 315 aaPredicted RBP8.34□□□□□ -1.07
LINC00963-214ENST00000622680 PLEKHA3Q9HB20 300 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 RANGRFQ9HD47 186 aaPredicted RBP8.34□□□□□ -1.07
LINC00963-214ENST00000622680 KMT2AQ03164 3969 aa8.34□□□□□ -1.07
LINC00963-214ENST00000622680 CASQ2O14958 399 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-214ENST00000622680 SLC22A1O15245 554 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 PROP1O75360 226 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 JTBO76095 146 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 APELAP0DMC3 54 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 ZP3P21754 424 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 MC5RP33032 325 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 RPS16P62249 146 aaKnown RBP8.33□□□□□ -1.08
LINC00963-214ENST00000622680 HLA-DRB3P79483 266 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 ST3GAL4Q11206 333 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 DYRK1AQ13627 763 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 KLF5Q13887 457 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-214ENST00000622680 ZNF562Q6V9R5 426 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 MOB1BQ7L9L4 216 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 GTSCR1Q86UQ5 136 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-214ENST00000622680 NRG4Q8WWG1 115 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 GGHQ92820 318 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 TUBA4BQ9H853 241 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 LRRC42Q9Y546 428 aa8.33□□□□□ -1.08
LINC00963-214ENST00000622680 RBMXL2O75526 392 aaKnown RBP8.32□□□□□ -1.08
LINC00963-214ENST00000622680 SPDEFO95238 335 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 IFNA6P05013 189 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 CSN3P07498 182 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 CEACAM6P40199 344 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 AQP4P55087 323 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 TAS2R43P59537 309 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 RBM48Q5RL73 367 aaKnown RBP8.32□□□□□ -1.08
LINC00963-214ENST00000622680 LCN12Q6JVE5 192 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 TSNAXQ99598 290 aaKnown RBP8.32□□□□□ -1.08
LINC00963-214ENST00000622680 WFDC10AQ9H1F0 79 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 COA4Q9NYJ1 87 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 AK3Q9UIJ7 227 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 CEPT1Q9Y6K0 416 aa8.32□□□□□ -1.08
LINC00963-214ENST00000622680 H0Y980 276 aa8.31□□□□□ -1.08
LINC00963-214ENST00000622680 H3BUA1 57 aa8.31□□□□□ -1.08
LINC00963-214ENST00000622680 M0R1X1 148 aa8.31□□□□□ -1.08
LINC00963-214ENST00000622680 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
LINC00963-214ENST00000622680 MYL12BO14950 172 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms