RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MFSD4AQ8N468 514 aa7.62□□□□□ -1.19
HDAC9-229ENST00000622668 FAM169BQ8N8A8 192 aa7.62□□□□□ -1.19
HDAC9-229ENST00000622668 TPPP3Q9BW30 176 aa7.62□□□□□ -1.19
HDAC9-229ENST00000622668 CLEC5AQ9NY25 188 aa7.62□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A10PA6NDY2 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A18PA6NE21 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A16PA6NEW6 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A20PA6NIJ5 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A8PA6NJQ4 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A7PA6NKC0 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A22PA8MWA6 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A12PA8MX19 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A5PA8MXJ8 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A23PA8MXZ1 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 LILRA1O75019 489 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A15PP0C7V4 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A13PP0C7W8 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A14PP0C7W9 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM90A24PP0C7X0 464 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 ZNF266Q14584 549 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 SLC35E4Q6ICL7 350 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 VMO1Q7Z5L0 202 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 CELF2-AS1Q8N7Q2 184 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 DUSP18Q8NEJ0 188 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 GPHA2Q96T91 129 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 TMEM133Q9H2Q1 129 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 LIME1Q9H400 295 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 TCRBV4S1A1TA0A5B7 111 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 KCNAB3O43448 404 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 RPL8P62917 257 aaKnown RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 SSBP1Q04837 148 aaKnown RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 DRAM1Q8N682 238 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 Q8WTZ3 238 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 C18orf12Q96KH6 178 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 BBC3Q96PG8 261 aaPredicted RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 DCAF16Q9NXF7 216 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 V9GYS6 101 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 TXNL1O43396 289 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 ZNF674Q2M3X9 581 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 FAM106AQ4KMX7 169 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 ZNF524Q96C55 264 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 NAA60Q9H7X0 242 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 SLC2A9Q9NRM0 540 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 ZNF107Q9UII5 783 aaPredicted RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 KIAA1324LA8MWY0 1029 aaPredicted RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 F6UZH7 168 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 SOX15O60248 233 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 NTF4P34130 210 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 YLPM1P49750 1951 aaKnown RBP7.61□□□□□ -1.19
HDAC9-229ENST00000622668 LYPD2Q6UXB3 125 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 ZBTB34Q8NCN2 500 aa7.61□□□□□ -1.19
HDAC9-229ENST00000622668 PIN1P1O15428 100 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 ACAA1P09110 424 aaPredicted RBP7.6□□□□□ -1.19
HDAC9-229ENST00000622668 OR10J4P0C629 311 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 GABRB1P18505 474 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 LRRC75BQ2VPJ9 315 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 RPL39P5Q59GN2 51 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 FDX2Q6P4F2 183 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 OVCH2Q7RTZ1 564 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 SSMEM1Q8WWF3 244 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 RBPMSQ93062 196 aaKnown RBP7.6□□□□□ -1.19
HDAC9-229ENST00000622668 Q96M66 194 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 ABHD1Q96SE0 405 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 TRAF4Q9BUZ4 470 aaPredicted RBP7.6□□□□□ -1.19
HDAC9-229ENST00000622668 C19orf12Q9NSK7 152 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 TIMM9Q9Y5J7 89 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 DSCAMO60469 2012 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 TCF21O43680 179 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 PTBP1P26599 531 aaKnown RBP eCLIP7.6□□□□□ -1.19
HDAC9-229ENST00000622668 MOGAT2Q3SYC2 334 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 SEM1Q6ZVN7 128 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 FAM213BQ8TBF2 198 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 IGHV4-30-2A0A087WSY4 118 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 A0A0G2JK05 382 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 PQLC2LA1A4F0 135 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 RAB4BP61018 213 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 TMEM249Q2WGJ8 235 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 RTN4RL2Q86UN3 420 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 LINC00052Q96N35 136 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 KCNK7Q9Y2U2 307 aa7.6□□□□□ -1.19
HDAC9-229ENST00000622668 ETV2O00321 342 aaPredicted RBP7.59□□□□□ -1.19
HDAC9-229ENST00000622668 MLNRO43193 412 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TRAPPC2P0DI81 140 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TRAPPC2BP0DI82 140 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TAS2R45P59539 299 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 RHOFQ9HBH0 211 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TMED3Q9Y3Q3 217 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 SNRPGP15A8MWD9 76 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 HPRT1P00492 218 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TPT1P13693 172 aaKnown RBP7.59□□□□□ -1.19
HDAC9-229ENST00000622668 GATA3P23771 443 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 CHATP28329 748 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 PLAURQ03405 335 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 CTF1Q16619 201 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 TMEM30BQ3MIR4 351 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 C1orf100Q5SVJ3 147 aa7.59□□□□□ -1.19
HDAC9-229ENST00000622668 ZNF324BQ6AW86 544 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms