RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TRGC2P03986 189 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 GLIPR1P48060 266 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 LHX2P50458 406 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 SERF2P84101 59 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 ZNF343Q6P1L6 599 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 SLC35E3Q7Z769 313 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 ZNF251Q9BRH9 671 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 OPN3Q9H1Y3 402 aaPredicted RBP10.94□□□□□ -0.66
MSH6-215ENST00000622629 SMDT1Q9H4I9 107 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 OR6C3Q9NZP0 311 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 CELA3BP08861 270 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 GNB1P62873 340 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 TAF15Q92804 592 aaKnown RBP eCLIP10.94□□□□□ -0.66
MSH6-215ENST00000622629 TMEM18Q96B42 140 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 TMEM204Q9BSN7 226 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 PQLC2LA1A4F0 135 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 TMPRSS2O15393 492 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 NEURL1O76050 574 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 SMIM6P0DI80 62 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 ERVFC1-1P60608 527 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 STUMQ69YW2 141 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 FREM1Q5H8C1 2179 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 XKRY2A2RUG3 117 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 TMEM210A6NLX4 147 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 CLDN18P56856 261 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 PRR27Q6MZM9 219 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 ZNF705AQ6ZN79 300 aaPredicted RBP10.93□□□□□ -0.66
MSH6-215ENST00000622629 MYPOPQ86VE0 399 aaPredicted RBP10.93□□□□□ -0.66
MSH6-215ENST00000622629 HSD17B10Q99714 261 aaKnown RBP10.93□□□□□ -0.66
MSH6-215ENST00000622629 RBKSQ9H477 322 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 SEC14L6B5MCN3 397 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 HSPB1P04792 205 aaKnown RBP10.93□□□□□ -0.66
MSH6-215ENST00000622629 OTX1P32242 354 aaPredicted RBP10.93□□□□□ -0.66
MSH6-215ENST00000622629 SSTR5P35346 364 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 TAS2R45P59539 299 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 Q0VFX4 171 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 ZBTB34Q8NCN2 500 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 OR4S2Q8NH73 311 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 WFDC1Q9HC57 220 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 RFNGQ9Y644 331 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 AUP1Q9Y679 476 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 TECTAO75443 2155 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 GABRA6Q16445 453 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 TRAT1Q6PIZ9 186 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
MSH6-215ENST00000622629 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 ZNF891A8MT65 544 aaPredicted RBP10.92□□□□□ -0.66
MSH6-215ENST00000622629 ZG16O60844 167 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 S1PR2O95136 353 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 CLDN14O95500 239 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 TNFRSF1AP19438 455 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 SUB1P53999 127 aaKnown RBP eCLIP10.92□□□□□ -0.666e-8■■■□□ 14.9
MSH6-215ENST00000622629 CYYR1Q96J86 154 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 USB1Q9BQ65 265 aaKnown RBP10.92□□□□□ -0.66
MSH6-215ENST00000622629 WIPI2Q9Y4P8 454 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 TRAPPC1Q9Y5R8 145 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 CNIH1O95406 144 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 DEFA4P12838 97 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 BMPERQ8N8U9 685 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 OR10A7Q8NGE5 316 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 ZNF71Q9NQZ8 489 aaPredicted RBP10.92□□□□□ -0.66
MSH6-215ENST00000622629 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 CRYABP02511 175 aaKnown RBP10.92□□□□□ -0.66
MSH6-215ENST00000622629 NTF3P20783 257 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 HES1Q14469 280 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 C18orf12Q96KH6 178 aa10.92□□□□□ -0.66
MSH6-215ENST00000622629 TGIF2-C20orf24A0A0A6YYL0 155 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 B4DEV8 164 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 ADH4P08319 380 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 CSRP1P21291 193 aaKnown RBP10.91□□□□□ -0.66
MSH6-215ENST00000622629 RAB7AP51149 207 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 MEF2BQ02080 365 aaPredicted RBP10.91□□□□□ -0.66
MSH6-215ENST00000622629 TNFRSF9Q07011 255 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 HFEQ30201 348 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 FDCSPQ8NFU4 85 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 OR8G5Q8NG78 346 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 LEAP2Q969E1 77 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 DOK5Q9P104 306 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 GFRALQ6UXV0 394 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 SLC35D1Q9NTN3 355 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 IL3RAP26951 378 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 THBS3P49746 956 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 CCL20P78556 96 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 PSG7Q13046 419 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
MSH6-215ENST00000622629 ACSM6Q6P461 480 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 RND1Q92730 232 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 IL22RA2Q969J5 263 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 OR2V2Q96R30 315 aa10.91□□□□□ -0.66
MSH6-215ENST00000622629 FAM103A1Q9BTL3 118 aaKnown RBP10.91□□□□□ -0.66
MSH6-215ENST00000622629 ZNF331Q9NQX6 463 aaPredicted RBP10.91□□□□□ -0.66
MSH6-215ENST00000622629 FAM157CP0CG43 387 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 CCL8P80075 99 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 SRSF4Q08170 494 aaKnown RBP10.9□□□□□ -0.66
MSH6-215ENST00000622629 PMS2P11Q13670 270 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 ZNF645Q8N7E2 425 aa10.9□□□□□ -0.66
MSH6-215ENST00000622629 RHOVQ96L33 236 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms