RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 SCOCQ9UIL1 159 aa18.68■□□□□ 0.58
ATXN3-253ENST00000621269 V9GY05 133 aa18.68■□□□□ 0.58
ATXN3-253ENST00000621269 FOXI3A8MTJ6 420 aaPredicted RBP18.67■□□□□ 0.58
ATXN3-253ENST00000621269 SCTP09683 121 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 MAP2K4P45985 399 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 TMEM50BP56557 158 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 CX3CL1P78423 397 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 C2orf76Q3KRA6 126 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 OR5AN1Q8NGI8 311 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 PRR25Q96S07 402 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 RNF5Q99942 180 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 ZNF221Q9UK13 617 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 RNF150Q9ULK6 438 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 COL7A1Q02388 2944 aa18.67■□□□□ 0.58
ATXN3-253ENST00000621269 A0A1W2PN81 502 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 DENRO43583 198 aaKnown RBP18.66■□□□□ 0.58
ATXN3-253ENST00000621269 CHRNA7P36544 502 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 GNB1P62873 340 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 MRPS15P82914 257 aaKnown RBP18.66■□□□□ 0.58
ATXN3-253ENST00000621269 TMEM267Q0VDI3 215 aaPredicted RBP18.66■□□□□ 0.58
ATXN3-253ENST00000621269 TCTEX1D1Q8N7M0 179 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 PTX4Q96A99 478 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATXN3-253ENST00000621269 FOXA2Q9Y261 457 aaPredicted RBP18.66■□□□□ 0.58
ATXN3-253ENST00000621269 FBXO7Q9Y3I1 522 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 A3GALT2U3KPV4 340 aa18.66■□□□□ 0.58
ATXN3-253ENST00000621269 TRDCB7Z8K6 153 aa18.65■□□□□ 0.58
ATXN3-253ENST00000621269 FCN1O00602 326 aa18.65■□□□□ 0.58
ATXN3-253ENST00000621269 CRIP2P52943 208 aaPredicted RBP18.65■□□□□ 0.58
ATXN3-253ENST00000621269 NDPQ00604 133 aa18.65■□□□□ 0.58
ATXN3-253ENST00000621269 DRAXINQ8NBI3 349 aaPredicted RBP18.65■□□□□ 0.58
ATXN3-253ENST00000621269 CLCC1Q96S66 551 aa18.65■□□□□ 0.58
ATXN3-253ENST00000621269 METTL1Q9UBP6 276 aaKnown RBP18.65■□□□□ 0.58
ATXN3-253ENST00000621269 INSL3P51460 131 aa18.64■□□□□ 0.57
ATXN3-253ENST00000621269 PLAC9Q5JTB6 97 aa18.64■□□□□ 0.57
ATXN3-253ENST00000621269 HES5Q5TA89 166 aa18.64■□□□□ 0.57
ATXN3-253ENST00000621269 RAB22AQ9UL26 194 aa18.64■□□□□ 0.57
ATXN3-253ENST00000621269 PDCD5O14737 125 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 CD3GP09693 182 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 HSPA13P48723 471 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 PSG5Q15238 335 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 C19orf54Q5BKX5 351 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 ASPHD1Q5U4P2 390 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 PYHIN1Q6K0P9 492 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 PPP1R27Q86WC6 154 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 TSNAXQ99598 290 aaKnown RBP18.63■□□□□ 0.57
ATXN3-253ENST00000621269 RDH8Q9NYR8 311 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 ZNF256Q9Y2P7 627 aaPredicted RBP18.63■□□□□ 0.57
ATXN3-253ENST00000621269 LSM4Q9Y4Z0 139 aaKnown RBP18.63■□□□□ 0.57
ATXN3-253ENST00000621269 NUBP2Q9Y5Y2 271 aa18.63■□□□□ 0.57
ATXN3-253ENST00000621269 TMEM272A0A1B0GTI8 110 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 LDLRAD4O15165 306 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 SOX15O60248 233 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 APOA2P02652 100 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 TFAP2AP05549 437 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 NHLRC4P0CG21 123 aaPredicted RBP18.62■□□□□ 0.57
ATXN3-253ENST00000621269 CD40LGP29965 261 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 SERPINB10P48595 397 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 RPS16P62249 146 aaKnown RBP18.62■□□□□ 0.57
ATXN3-253ENST00000621269 CD200R1LQ6Q8B3 271 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 ZNF367Q7RTV3 350 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 OR4A4PQ8NGN8 299 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 CASTOR1Q8WTX7 329 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 DCUN1D4Q92564 292 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 RAB3CQ96E17 227 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 CNBD2Q96M20 576 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 BLOC1S6Q9UL45 172 aa18.62■□□□□ 0.57
ATXN3-253ENST00000621269 IGKV1-6A0A0C4DH72 117 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 OVOL1O14753 267 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 PROP1O75360 226 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 EGR2P11161 476 aaPredicted RBP18.61■□□□□ 0.57
ATXN3-253ENST00000621269 TBCEQ15813 527 aaPredicted RBP18.61■□□□□ 0.57
ATXN3-253ENST00000621269 AKIRIN2Q53H80 203 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 ACTBL2Q562R1 376 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 UNQ5815/PRO19632Q6UWF5 114 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 IZUMO2Q6UXV1 221 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 ZNF562Q6V9R5 426 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 ZNF429Q86V71 674 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 PDPNQ86YL7 162 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 ZNF383Q8NA42 475 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 WWC2-AS2Q96NR7 200 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 FAM103A1Q9BTL3 118 aaKnown RBP18.61■□□□□ 0.57
ATXN3-253ENST00000621269 ALX4Q9H161 411 aaPredicted RBP18.61■□□□□ 0.57
ATXN3-253ENST00000621269 GAB2Q9UQC2 676 aa18.61■□□□□ 0.57
ATXN3-253ENST00000621269 ERICH4A6NGS2 130 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 LINC01619G3V211 115 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 SPDEFO95238 335 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 LY86O95711 162 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 CA2P00918 260 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 IGKV1-16P04430 117 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 LGALS1P09382 135 aaKnown RBP18.6■□□□□ 0.57
ATXN3-253ENST00000621269 GADD45AP24522 165 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 PLA2G7Q13093 441 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.6■□□□□ 0.57
ATXN3-253ENST00000621269 FLYWCH2Q96CP2 140 aaKnown RBP18.6■□□□□ 0.57
ATXN3-253ENST00000621269 TOLLIPQ9H0E2 274 aa18.6■□□□□ 0.57
ATXN3-253ENST00000621269 TRAV1-2A0A0B4J238 106 aa18.59■□□□□ 0.57
ATXN3-253ENST00000621269 M0R1X1 148 aa18.59■□□□□ 0.57
ATXN3-253ENST00000621269 BET1O15155 118 aa18.59■□□□□ 0.57
ATXN3-253ENST00000621269 FABP7O15540 132 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms