RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TM4SF19Q96DZ7 209 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 QTRT1Q9BXR0 403 aaKnown RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF107Q9UII5 783 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TNFSF10P50591 281 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TMPRSS3P57727 454 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 IRF3Q14653 427 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TMEM45BQ96B21 275 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 C18orf15Q96N68 181 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 PTPRZ1P23471 2315 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 LY75O60449 1722 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 PRSS23O95084 383 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 FHITP49789 147 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 NUBP1P53384 320 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 Q5BKY6 102 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 SPSB2Q99619 263 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 MRPS18BQ9Y676 258 aaKnown RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TRIP12Q14669 1992 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 HIST1H1AQ02539 215 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 APOBEC4Q8WW27 367 aaKnown RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 ASB5Q8WWX0 329 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 PRNDQ9UKY0 176 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 IGHV5-51A0A0C4DH38 117 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 A0A1W2PPE3 182 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 FTH1P19P0C7X4 201 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 COX6B1P14854 86 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 KIAA0040Q15053 153 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PRSS27Q9BQR3 290 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 RBKSQ9H477 322 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 ZFP64Q9NPA5 681 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 ELOVL5Q9NYP7 299 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 WNK3Q9BYP7 1800 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 C19orf67A6NJJ6 358 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 TMPRSS2O15393 492 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 GAPDHP04406 335 aaKnown RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 ISG15P05161 165 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 MBNL2Q5VZF2 373 aaKnown RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 TMEM252Q8N6L7 170 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 ABHD14BQ96IU4 210 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 MCM3APO60318 1980 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 J3QR06 171 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 APOMO95445 188 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 HOXC4P09017 264 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PNLIPP16233 465 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 ROM1Q03395 351 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 WDR54Q9H977 334 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 COL4A5P29400 1685 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 SHROOM3Q8TF72 1996 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 GCM2O75603 506 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 YBX1P67809 324 aaKnown RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PGLYRP3Q96LB9 341 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 SSBP3Q9BWW4 388 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PPP1R3EQ9H7J1 279 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PGPA6NDG6 321 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 NKX2-2O95096 273 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 CCL4P13236 92 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PSG6Q00889 435 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 C3AR1Q16581 482 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PRICKLE4Q2TBC4 344 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
COL4A6-210ENST00000621266 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 MOB4Q9Y3A3 225 aa8.59□□□□□ -1.03
COL4A6-210ENST00000621266 KIR3DL2P43630 455 aa8.59□□□□□ -1.04
COL4A6-210ENST00000621266 CACNG7P62955 275 aa8.59□□□□□ -1.04
COL4A6-210ENST00000621266 ZNF764Q96H86 408 aaPredicted RBP8.59□□□□□ -1.04
COL4A6-210ENST00000621266 KCNE1BA0A087WTH5 132 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 TFPI2P48307 235 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 SSPNQ14714 243 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 HOGA1Q86XE5 327 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 P2RX4Q99571 388 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 KCNE5Q9UJ90 142 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 TAF1LQ8IZX4 1826 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 CDX4O14627 284 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-210ENST00000621266 IGHV4-39P01824 125 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 NXPH1P58417 271 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 COL10A1Q03692 680 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 MIC13Q5XKP0 118 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 GPBAR1Q8TDU6 330 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 ZNF414Q96IQ9 312 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 NPVFQ9HCQ7 196 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 C5orf67F2Z3F1 127 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 CCL21O00585 134 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 MMD2Q8IY49 270 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 OR52M1Q8NGK5 317 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 RND1Q92730 232 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 IGHV3OR15-7A0A075B7D8 119 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 HYPMO75409 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms