RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 NKX1-2Q9UD57 310 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-210ENST00000621245 AK3Q9UIJ7 227 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 U3KQK5 164 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 A0A087WW49 117 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 IGKV1-6A0A0C4DH72 117 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 A0A1W2PN81 502 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 H0YJW9 148 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 RAMP3O60896 148 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 CD37P11049 281 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 CHRNA7P36544 502 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 RAB9AP51151 201 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 RPS25P62851 125 aaKnown RBP8.84□□□□□ -0.99
CPNE3-210ENST00000621245 RUNX1Q01196 453 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF616Q08AN1 781 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 IRF3Q14653 427 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 LY6G6FQ5SQ64 297 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 LIPKQ5VXJ0 399 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 TMEM91Q6ZNR0 172 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 CEACAM19Q7Z692 300 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF554Q86TJ5 538 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 DRAXINQ8NBI3 349 aaPredicted RBP8.84□□□□□ -0.99
CPNE3-210ENST00000621245 TMEM203Q969S6 136 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 GALMQ96C23 342 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 UBE2E2Q96LR5 201 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 NEDD4LQ96PU5 975 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 CST11Q9H112 138 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 RAB9BQ9NP90 201 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 ISYNA1Q9NPH2 558 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.84□□□□□ -0.99
CPNE3-210ENST00000621245 VSIG4Q9Y279 399 aa8.84□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
CPNE3-210ENST00000621245 TNCP24821 2201 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 PTGES3LE9PB15 166 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 RRHO14718 337 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 IGHV3-11P01762 117 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 SCTP09683 121 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 UCHL1P09936 223 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 UBBP0CG47 229 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 MAPK3P27361 379 aaPredicted RBP8.83□□□□□ -1
CPNE3-210ENST00000621245 MECP2P51608 486 aaKnown RBP8.83□□□□□ -1
CPNE3-210ENST00000621245 CLDN12P56749 244 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 CX3CL1P78423 397 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 HLA-DRB3P79483 266 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 SSBP2P81877 361 aaPredicted RBP8.83□□□□□ -1
CPNE3-210ENST00000621245 DEFA5Q01523 94 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 HSD17B12Q53GQ0 312 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 TMEM177Q53S58 311 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 LIN54Q6MZP7 749 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 NRG4Q8WWG1 115 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 PHYHIPQ92561 330 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
CPNE3-210ENST00000621245 C5orf30Q96GV9 206 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 CLCC1Q96S66 551 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 AGMATQ9BSE5 352 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 MND1Q9BWT6 205 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 C11orf54Q9H0W9 315 aaPredicted RBP8.83□□□□□ -1
CPNE3-210ENST00000621245 CHMP1AQ9HD42 196 aaPredicted RBP8.83□□□□□ -1
CPNE3-210ENST00000621245 C8orf4Q9NR00 106 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 AP5S1Q9NUS5 200 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 GHRLQ9UBU3 117 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 SLC23A1Q9UHI7 598 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 RNF150Q9ULK6 438 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 ERGIC3Q9Y282 383 aa8.83□□□□□ -1
CPNE3-210ENST00000621245 LY86O95711 162 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 IGKV1-16P04430 117 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 CD3GP09693 182 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 OR8U8P0C7N1 319 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 OR5H8P0DN80 308 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 SPNP16150 400 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 SRMP19623 302 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 CRIP2P52943 208 aaPredicted RBP8.82□□□□□ -1
CPNE3-210ENST00000621245 AQP4P55087 323 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 TMEM50BP56557 158 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 SPHARQ15513 63 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 MED22Q15528 200 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 RNLSQ5VYX0 342 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 GLT8D1Q68CQ7 371 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 TMEM65Q6PI78 240 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 OVCH2Q7RTZ1 564 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 ARPC1AQ92747 370 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 ARHGAP5-AS1Q96IT6 56 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 TOLLIPQ9H0E2 274 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 KIAA1456Q9P272 454 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 FBXL7Q9UJT9 491 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 FOXA2Q9Y261 457 aaPredicted RBP8.82□□□□□ -1
CPNE3-210ENST00000621245 AK6Q9Y3D8 172 aaKnown RBP8.82□□□□□ -1
CPNE3-210ENST00000621245 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
CPNE3-210ENST00000621245 TRIM64CA6NLI5 447 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 OVOL1O14753 267 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 ARPC1BO15143 372 aaKnown RBP8.81□□□□□ -1
CPNE3-210ENST00000621245 RGS11O94810 467 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 CA2P00918 260 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 MAP2K4P45985 399 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 PLAC9Q5JTB6 97 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 FAM71F2Q6NXP2 309 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 ZNF383Q8NA42 475 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 OR6M1Q8NGM8 313 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 KCNG3Q8TAE7 436 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms