RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 Q9N2K0 584 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 WASHC3Q9Y3C0 194 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 LCE6AA0A183 80 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 LDLRAD4O15165 306 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 ZBTB25P24278 435 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 MC5RP33032 325 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 RAB9AP51151 201 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 ZNF616Q08AN1 781 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 TCTEX1D1Q8N7M0 179 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 RCHY1Q96PM5 261 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 RNF5Q99942 180 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 C11orf54Q9H0W9 315 aaPredicted RBP17.09■□□□□ 0.33
SRRT-218ENST00000620394 FBXL15Q9H469 300 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 SMAD5-AS1Q9Y6J3 95 aa17.09■□□□□ 0.33
SRRT-218ENST00000620394 DNAH7Q8WXX0 4024 aa17.08■□□□□ 0.33
SRRT-218ENST00000620394 SOX15O60248 233 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 PROP1O75360 226 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 GNB1P62873 340 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 FABP5Q01469 135 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 GLDNQ6ZMI3 551 aaPredicted RBP17.08■□□□□ 0.32
SRRT-218ENST00000620394 FAM3DQ96BQ1 224 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 ARHGAP5-AS1Q96IT6 56 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 PECRQ9BY49 303 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 PALMDQ9NP74 551 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 SORL1Q92673 2214 aa17.08■□□□□ 0.32
SRRT-218ENST00000620394 SCTP09683 121 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 LYL1P12980 280 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 CALRP27797 417 aaKnown RBP17.07■□□□□ 0.32
SRRT-218ENST00000620394 RANBP1P43487 201 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 VEGFCP49767 419 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 INSL3P51460 131 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 CX3CL1P78423 397 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 TBCEQ15813 527 aaPredicted RBP17.07■□□□□ 0.32
SRRT-218ENST00000620394 ECSCRQ19T08 205 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 PLAC9Q5JTB6 97 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 CD200R1LQ6Q8B3 271 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 OR1N2Q8NGR9 330 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 MGLLQ99685 303 aa17.07■□□□□ 0.32
SRRT-218ENST00000620394 FOXA2Q9Y261 457 aaPredicted RBP17.07■□□□□ 0.32
SRRT-218ENST00000620394 IGKV1-6A0A0C4DH72 117 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 HSPA12AO43301 675 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 SPDEFO95238 335 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 EGR2P11161 476 aaPredicted RBP17.06■□□□□ 0.32
SRRT-218ENST00000620394 CEACAM6P40199 344 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 CLDN12P56749 244 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 ZNF260Q3ZCT1 412 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 OR56B1Q8NGI3 324 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 CMSS1Q9BQ75 279 aaKnown RBP17.06■□□□□ 0.32
SRRT-218ENST00000620394 TOLLIPQ9H0E2 274 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 ACOT13Q9NPJ3 140 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 NUBP2Q9Y5Y2 271 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 V9GY05 133 aa17.06■□□□□ 0.32
SRRT-218ENST00000620394 A0A1W2PN81 502 aa17.05■□□□□ 0.32
SRRT-218ENST00000620394 GSTP1P09211 210 aaKnown RBP17.05■□□□□ 0.32
SRRT-218ENST00000620394 CHRNA7P36544 502 aa17.05■□□□□ 0.32
SRRT-218ENST00000620394 TMEM272A0A1B0GTI8 110 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 H7C2Y5 167 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 FCN1O00602 326 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 MAP2K4P45985 399 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 PSMD7P51665 324 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 PLGLAQ15195 96 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 C2orf76Q3KRA6 126 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 PYHIN1Q6K0P9 492 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.04■□□□□ 0.32
SRRT-218ENST00000620394 OR5B12Q96R08 314 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 CCDC90BQ9GZT6 254 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 TPSG1Q9NRR2 321 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 KCNK7Q9Y2U2 307 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 SACSQ9NZJ4 4579 aa17.04■□□□□ 0.32
SRRT-218ENST00000620394 HUWE1Q7Z6Z7 4374 aaKnown RBP17.03■□□□□ 0.32
SRRT-218ENST00000620394 TRDCB7Z8K6 153 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 DENRO43583 198 aaKnown RBP17.03■□□□□ 0.32
SRRT-218ENST00000620394 DIRAS3O95661 229 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 LY86O95711 162 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 IGKV1-16P04430 117 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 LGALS1P09382 135 aaKnown RBP17.03■□□□□ 0.32
SRRT-218ENST00000620394 TMEM267Q0VDI3 215 aaPredicted RBP17.03■□□□□ 0.32
SRRT-218ENST00000620394 PLA2G7Q13093 441 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 PSG5Q15238 335 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 SSX1Q16384 188 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 ZNF367Q7RTV3 350 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 PDPNQ86YL7 162 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 ZNF383Q8NA42 475 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 OR4A4PQ8NGN8 299 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 TSNAXQ99598 290 aaKnown RBP17.03■□□□□ 0.32
SRRT-218ENST00000620394 CABLES2Q9BTV7 478 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 VCX3BQ9H321 246 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 RDH8Q9NYR8 311 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 METTL1Q9UBP6 276 aaKnown RBP17.03■□□□□ 0.32
SRRT-218ENST00000620394 ZNF221Q9UK13 617 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 GAB2Q9UQC2 676 aa17.03■□□□□ 0.32
SRRT-218ENST00000620394 TFAP2AP05549 437 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 SERPINB10P48595 397 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 HSPA13P48723 471 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 AKIRIN2Q53H80 203 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 ZNF562Q6V9R5 426 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 SBSPONQ8IVN8 264 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 DRAXINQ8NBI3 349 aaPredicted RBP17.02■□□□□ 0.32
SRRT-218ENST00000620394 DCUN1D4Q92564 292 aa17.02■□□□□ 0.32
SRRT-218ENST00000620394 ALX4Q9H161 411 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms