RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 CLDN17P56750 224 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 HAPLN4Q86UW8 402 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 CALHM1Q8IU99 346 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 PLXDC1Q8IUK5 500 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 KLHDC1Q8N7A1 406 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 OR10G9Q8NGN4 311 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 OR10G7Q8NGN6 311 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.2□□□□□ -0.94
UPF3A-212ENST00000619079 NCOR1P1Q9H4R4 102 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 KLRF1Q9NZS2 232 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 CACNG5Q9UF02 275 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 LAMTOR2Q9Y2Q5 125 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 MDFIC2A0A1B0GVS7 189 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 A0A1W2PQM1 296 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 FAM166BA8MTA8 275 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 ZNF814B7Z6K7 855 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 FAM90A26D6RGX4 464 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 F6UZH7 168 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 PAGE4O60829 102 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 SERF1AO75920 110 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 NAPSAO96009 420 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 IGKV1D-33P01593 117 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 IGKV1-33P01594 117 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 IAPPP10997 89 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 HNRNPA3P51991 378 aaKnown RBP9.2□□□□□ -0.94
UPF3A-212ENST00000619079 CLDN15P56746 228 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 Q0VG73 95 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 MMDQ15546 238 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 LRP11Q86VZ4 500 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 C1orf174Q8IYL3 243 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 SIGLECL1Q8N7X8 197 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 ZNF738Q8NE65 137 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 TXN2Q99757 166 aa9.2□□□□□ -0.94
UPF3A-212ENST00000619079 PCNX2A6NKB5 2137 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 ASXL3Q9C0F0 2248 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 HNF1AP20823 631 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 CDKN1AP38936 164 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 GFERP55789 205 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 BPIFB3P59826 476 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 RHBDD2Q6NTF9 364 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 BAGE3Q86Y29 109 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 BAGE2Q86Y30 109 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 ZNF709Q8N972 641 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 NABP1Q96AH0 204 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 SFRP2Q96HF1 295 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 DLL3Q9NYJ7 618 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 RP1P56715 2156 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 IGLV3-32A0A0A0MS00 114 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 A0A1W2PNR3 127 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 NDUFB8O95169 186 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 CRYGSP22914 178 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 CTRLP40313 264 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
UPF3A-212ENST00000619079 HES3Q5TGS1 186 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 STPG4Q8N801 248 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 OR5T1Q8NG75 326 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 OR10V1Q8NGI7 309 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 OR2AE1Q8NHA4 323 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 RNF138Q8WVD3 245 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 TMEM54Q969K7 222 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 GPHA2Q96T91 129 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 ZNF703Q9H7S9 590 aaPredicted RBP9.19□□□□□ -0.94
UPF3A-212ENST00000619079 ATP23Q9Y6H3 246 aa9.19□□□□□ -0.94
UPF3A-212ENST00000619079 WDFY3Q8IZQ1 3526 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 IGHV5-51A0A0C4DH38 117 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 DIRC3C9JPN6 131 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 DHHO43323 396 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 PPBPP02775 128 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 SCTP09683 121 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 CD33P20138 364 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 KITLGP21583 273 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 ARL4DP49703 201 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 LHX2P50458 406 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 MORN2Q502X0 79 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 ACSM6Q6P461 480 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 Q6ZN92 141 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 Q8NFD4 153 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 TXNDC17Q9BRA2 123 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 ALKBH7Q9BT30 221 aaPredicted RBP9.18□□□□□ -0.94
UPF3A-212ENST00000619079 TMEM147Q9BVK8 224 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 KCNIP2Q9NS61 270 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 TP53TG3Q9ULZ0 132 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 KIAA2026Q5HYC2 2103 aa9.18□□□□□ -0.94
UPF3A-212ENST00000619079 TRBV9A0A0B4J1U6 114 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 DEGS1O15121 323 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 TIAF1O95411 115 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 PSG2P11465 335 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 BMP5P22003 454 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 UBE2G2P60604 165 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 RAC1P63000 192 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 RPL19P84098 196 aaKnown RBP9.17□□□□□ -0.94
UPF3A-212ENST00000619079 TMEM249Q2WGJ8 235 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 ZNF468Q5VIY5 522 aaPredicted RBP9.17□□□□□ -0.94
UPF3A-212ENST00000619079 PLCXD3Q63HM9 321 aa9.17□□□□□ -0.94
UPF3A-212ENST00000619079 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
UPF3A-212ENST00000619079 TMEM14EPQ6UXP3 125 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms