RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 RPL5P46777 297 aaKnown RBP6.52□□□□□ -1.37
NEK3-209ENST00000618856 RORCP51449 518 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 GNG2P59768 71 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 CD83Q01151 205 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 CFHR3Q02985 330 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 EIF4EBP1Q13541 118 aaPredicted RBP6.52□□□□□ -1.37
NEK3-209ENST00000618856 HES1Q14469 280 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 HNF4GQ14541 408 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 GPR141Q7Z602 305 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 SAMD12Q8N8I0 201 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 ZNF383Q8NA42 475 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 DDB2Q92466 427 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 SNAPC3Q92966 411 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 RBMXL1Q96E39 390 aaKnown RBP6.52□□□□□ -1.37
NEK3-209ENST00000618856 DIABLOQ9NR28 239 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 LINC01548A6NM66 108 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 M0QZ24 198 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 BET1O15155 118 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 RBBP9O75884 186 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 TPPPO94811 219 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 HLA-DRB1P01911 266 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 EIF4EP06730 217 aaKnown RBP6.51□□□□□ -1.37
NEK3-209ENST00000618856 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 CD28P10747 220 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 ZNF182P17025 639 aaPredicted RBP6.51□□□□□ -1.37
NEK3-209ENST00000618856 CBX5P45973 191 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 GPR12P47775 334 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 TMBIM6P55061 237 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 TAS2R20P59543 309 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 ACTBP60709 375 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 MSMO1Q15800 293 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 RAB2BQ8WUD1 216 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 PHF21AQ96BD5 680 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 ST6GALNAC5Q9BVH7 336 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 SDHAF2Q9NX18 166 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 ZNF107Q9UII5 783 aaPredicted RBP6.51□□□□□ -1.37
NEK3-209ENST00000618856 RNF150Q9ULK6 438 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 WASHC3Q9Y3C0 194 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 OR2W1Q9Y3N9 320 aa6.51□□□□□ -1.37
NEK3-209ENST00000618856 PRKDCP78527 4128 aaKnown RBP6.51□□□□□ -1.37
NEK3-209ENST00000618856 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 NCBP2LA6PVI3 153 aaKnown RBP6.5□□□□□ -1.37
NEK3-209ENST00000618856 NBR2O15453 112 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 KCNAB3O43448 404 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 FBXO24O75426 580 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 IGKV1-16P04430 117 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 CRYGBP07316 175 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 OR8U9P0C7N5 309 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 PTHLHP12272 177 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 ELK1P19419 428 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 CNTFRP26992 372 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 CRIP2P52943 208 aaPredicted RBP6.5□□□□□ -1.37
NEK3-209ENST00000618856 LINC00205P59089 165 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 TAGLNQ01995 201 aaKnown RBP6.5□□□□□ -1.37
NEK3-209ENST00000618856 SPCS2Q15005 226 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 C5orf64Q2M2E5 130 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 ZNF660Q6AZW8 331 aaPredicted RBP6.5□□□□□ -1.37
NEK3-209ENST00000618856 FAM131AQ6UXB0 335 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 TREML4Q6UXN2 200 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 NDUFA11Q86Y39 141 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 PDPNQ86YL7 162 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 GVQW1Q8N7I0 195 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 BEST4Q8NFU0 473 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 OR5AU1Q8NGC0 362 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 OR8U1Q8NH10 309 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 DYNC2LI1Q8TCX1 351 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 GPX8Q8TED1 209 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 CHPT1Q8WUD6 406 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 AP3S1Q92572 193 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 HSPB9Q9BQS6 159 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 OR2D2Q9H210 308 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 MMP27Q9H306 513 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 COMMD3Q9UBI1 195 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 ZNF221Q9UK13 617 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 ADAM30Q9UKF2 790 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
NEK3-209ENST00000618856 IGHV7-81A0A0B4J1V7 117 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 IGKV1D-13A0A0B4J2D9 117 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 AP4M1O00189 453 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 HPGDSO60760 199 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 SLC22A5O76082 557 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 SPDEFO95238 335 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 TSPAN15O95858 294 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 IGLV2-23P01705 113 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 IGKV1-13P0DP09 117 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 NFYAP23511 347 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 PPIFP30405 207 aaKnown RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 DUTP33316 252 aaKnown RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 SOX6P35712 828 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 MMDQ15546 238 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 MRGPRG-AS1Q2M3A8 158 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 TMEM69Q5SWH9 247 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 C10orf99Q6UWK7 81 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 DHRS11Q6UWP2 260 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 GLDNQ6ZMI3 551 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 OVCH2Q7RTZ1 564 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms