RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
PRKD1-209ENST00000616995 PKIBQ9C010 78 aa12.22□□□□□ -0.45
PRKD1-209ENST00000616995 IGKV1-5P01602 117 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 FGF7P21781 194 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 DLK1P80370 383 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 ID3Q02535 119 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 Q6P435 159 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 BHLHA15Q7RTS1 189 aaPredicted RBP12.21□□□□□ -0.45
PRKD1-209ENST00000616995 RAB39BQ96DA2 213 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 CHD8Q9HCK8 2581 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 CYB5BO43169 146 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 RBMS3Q6XE24 437 aaKnown RBP12.21□□□□□ -0.45
PRKD1-209ENST00000616995 Q6ZSR3 168 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 LFNGQ8NES3 379 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 HIST1H2BAQ96A08 127 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 LOXL4Q96JB6 756 aa12.21□□□□□ -0.45
PRKD1-209ENST00000616995 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.46
PRKD1-209ENST00000616995 CCL8P80075 99 aa12.21□□□□□ -0.46
PRKD1-209ENST00000616995 KRTAP27-1Q3LI81 207 aa12.21□□□□□ -0.46
PRKD1-209ENST00000616995 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.46
PRKD1-209ENST00000616995 OR2V2Q96R30 315 aa12.21□□□□□ -0.46
PRKD1-209ENST00000616995 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.46
PRKD1-209ENST00000616995 A0A1B0GU03 582 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 RNF212BA8MTL3 300 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 PRDX2P32119 198 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 FAM27E3Q08E93 113 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 OR4A16Q8NH70 328 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 S100PBPQ96BU1 408 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 RBKSQ9H477 322 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 IGKV1-39P01597 117 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 IGKV1D-39P04432 117 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 TAS2R30P59541 319 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 TAAR6Q96RI8 345 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 PCSK5Q92824 1860 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 K7N7A8 449 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 EGR1P18146 543 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 HMGN3Q15651 99 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 ZNF497Q6ZNH5 498 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 OR4F5Q8NH21 305 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 OR4F4Q96R69 305 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
PRKD1-209ENST00000616995 SPG11Q96JI7 2443 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 NKX6-1P78426 367 aaPredicted RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 UNKLQ9H9P5 680 aaKnown RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 HBE1P02100 147 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 ERVFRD-1P60508 538 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 ERVK-16P61578 105 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 ZNF880Q6PDB4 577 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 LINC00518Q8N0U6 118 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 LYG1Q8N1E2 194 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 ZDHHC11Q9H8X9 412 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 RALYQ9UKM9 306 aaKnown RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 SNRPCP09234 159 aaKnown RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 RAB5AP20339 215 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 MDH2P40926 338 aaKnown RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 PAX9P55771 341 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 MOB1BQ7L9L4 216 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 DTD1Q8TEA8 209 aa12.19□□□□□ -0.46
PRKD1-209ENST00000616995 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 PATZ1Q9HBE1 687 aaKnown RBP12.19□□□□□ -0.46
PRKD1-209ENST00000616995 OOEPA6NGQ2 149 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 CD200P41217 278 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 WDR82Q6UXN9 313 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
PRKD1-209ENST00000616995 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
PRKD1-209ENST00000616995 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 PLXNB1O43157 2135 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 ODAMA1E959 279 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 COLCA2A8K830 154 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 PRR33A8MZF0 331 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 YIF1AO95070 293 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 SCAF4O95104 1147 aaKnown RBP12.18□□□□□ -0.46
PRKD1-209ENST00000616995 HOXA1P49639 335 aaPredicted RBP12.18□□□□□ -0.46
PRKD1-209ENST00000616995 PRB3Q04118 309 aaPredicted RBP12.18□□□□□ -0.46
PRKD1-209ENST00000616995 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 ACP7Q6ZNF0 438 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
PRKD1-209ENST00000616995 CHD3Q12873 2000 aaKnown RBP12.18□□□□□ -0.46
PRKD1-209ENST00000616995 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 CYB5R3P00387 301 aaPredicted RBP12.17□□□□□ -0.46
PRKD1-209ENST00000616995 MT-ND4LP03901 98 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 Q6ZR03 302 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 PTPRQQ9UMZ3 2332 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
PRKD1-209ENST00000616995 SSMEM1Q8WWF3 244 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 RND1Q92730 232 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 WIPI2Q9Y4P8 454 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 ZNF737O75373 536 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 CLDN14O95500 239 aa12.17□□□□□ -0.46
PRKD1-209ENST00000616995 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms