RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	POLDIP2	Q9Y2S7	368 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	HEXA	P06865	529 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	APOBEC3A	P31941	199 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PLA2G5	P39877	138 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	OR3A1	P47881	315 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	RAB5C	P51148	216 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	RPS16	P62249	146 aa	Known RBP	11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SLA	Q13239	276 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ZNF497	Q6ZNH5	498 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	OR1L1	Q8NH94	360 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ATP6V0B	Q99437	205 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TMEM208	Q9BTX3	173 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	GGACT	Q9BVM4	153 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SLC35B3	Q9H1N7	401 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	GFOD1	Q9NXC2	390 aa		11.71	□□□□□ -0.53
CACNA1C-231	ENST00000616390	IGHV3-43	A0A0B4J1X8	118 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390		A0A1W2PPE2	198 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	HAND1	O96004	215 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IGHV3-43D	P0DP04	118 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GABRA6	Q16445	453 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	FAM24B	Q8N5W8	94 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RFESD	Q8TAC1	157 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RNF115	Q9Y4L5	304 aa		11.71	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ROS1	P08922	2347 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DEFB108A	A8MXU0	73 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	LINC00205	P59089	165 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RPL23A	P62750	156 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SOHLH1	Q5JUK2	328 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SPANXN5	Q5MJ07	72 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	BTNL3	Q6UXE8	466 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	UNQ6494/PRO21346	Q6UXR6	183 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	S100A7A	Q86SG5	101 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	C9orf106	Q8NAJ2	232 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR52L2P	Q8NGH6	319 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	hCG_1809904	A0A1W2PP81	198 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390		A0A1W2PR64	198 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390		A0A1W2PRV1	198 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RBFOX3	A6NFN3	312 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	MLNR	O43193	412 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TIMM8A	O60220	97 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	KRAS	P01116	189 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IGKV1-5	P01602	117 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PGA5	P0DJD9	388 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GABRA2	P47869	451 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DMRTA1	Q5VZB9	504 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF880	Q6PDB4	577 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DRAM1	Q8N682	238 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RNASE8	Q8TDE3	154 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	FAM210B	Q96KR6	192 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ATG101	Q9BSB4	218 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PSENEN	Q9NZ42	101 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	AKAP13	Q12802	2813 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ATM	Q13315	3056 aa		11.7	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RAB2A	P61019	212 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DEFB109B	Q30KR1	87 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	MRGPRD	Q8TDS7	321 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CABLES2	Q9BTV7	478 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR2D2	Q9H210	308 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PCNX1	Q96RV3	2341 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RAMP3	O60896	148 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IFNA5	P01569	189 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	FTH1P19	P0C7X4	201 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IL2RG	P31785	369 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	FGF8	P55075	233 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TLE1	Q04724	770 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF585B	Q52M93	769 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR8G2P	Q6IF36	304 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SPSB3	Q6PJ21	355 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PRSS57	Q6UWY2	283 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF295-AS1	Q8N0V1	137 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	COMMD1	Q8N668	190 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ABHD17A	Q96GS6	310 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ATP5S	Q99766	215 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	VSIR	Q9H7M9	311 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PIEZO2	Q9H5I5	2752 aa		11.69	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TRBV6-6	A0A0A6YYG2	114 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DUXB	A0A1W2PPF3	345 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CLEC18A	A5D8T8	446 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SYNGR2	O43760	224 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IGHV3-13	P01766	116 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IGHV3-7	P01780	117 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR2B8P	P59922	312 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ERVK11-1	P61568	191 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ADAM5	Q6NVV9	412 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390		Q6ZT83	130 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CLEC18C	Q8NCF0	446 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF596	Q8TC21	504 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	HIST1H2BA	Q96A08	127 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	KCNIP1	Q9NZI2	227 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CLCF1	Q9UBD9	225 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	METRN	Q9UJH8	293 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390		A0A1B0GU03	582 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	G6PC	P35575	357 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	MDH2	P40926	338 aa	Known RBP	11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	KIR2DL2	P43627	348 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SULT1A1	P50225	295 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SELENOV	P59797	346 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ARL16	Q0P5N6	197 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms