RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 E7EUB6 86 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 M0R1X1 148 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 PDCD5O14737 125 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 FBXO24O75426 580 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 ELK1P19419 428 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF137PP52743 207 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 CD83Q01151 205 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 C10orf55Q5SWW7 151 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 EDARADDQ8WWZ3 215 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 TRBV6-7A0A0A0MS04 114 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 H7C2Y5 167 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 CTDSP2O14595 271 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 MRPS14O60783 128 aaKnown RBP4.47□□□□□ -1.69
CPNE3-208ENST00000614678 MOSP00540 346 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 IGLL1P15814 213 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 ZBTB25P24278 435 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 GPR12P47775 334 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 EBI3Q14213 229 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 SNX29P2Q8IUI4 249 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 THRSPQ92748 146 aa4.47□□□□□ -1.69
CPNE3-208ENST00000614678 TRBV6-6A0A0A6YYG2 114 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 HLA-DQB1P01920 261 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 PRH1P02810 166 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 HOXD3P31249 432 aaPredicted RBP4.46□□□□□ -1.69
CPNE3-208ENST00000614678 RAB7AP51149 207 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 FAAP20Q6NZ36 180 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 ETV3LQ6ZN32 361 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 OR10A7Q8NGE5 316 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 ABCG5Q9H222 651 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 AUNIPQ9H7T9 357 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 TAS2R8Q9NYW2 309 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 PITPNC1Q9UKF7 332 aa4.46□□□□□ -1.69
CPNE3-208ENST00000614678 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 SLC25A17O43808 307 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 RAMP3O60896 148 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 OPN1MWP04001 364 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 OPN1MW2P0DN77 364 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 OPN1MW3P0DN78 364 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 RAB6AP20340 208 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 OR8H3Q8N146 312 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 STPG2Q8N412 459 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 OR4D10Q8NGI6 311 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 SLC25A46Q96AG3 418 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 ABRACLQ9P1F3 81 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 ADAM30Q9UKF2 790 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 AMMECR1Q9Y4X0 333 aaPredicted RBP4.46□□□□□ -1.7
CPNE3-208ENST00000614678 SORL1Q92673 2214 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 ARPC1BO15143 372 aaKnown RBP4.46□□□□□ -1.7
CPNE3-208ENST00000614678 CA11O75493 328 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 IGLV2-23P01705 113 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 IGHG2P01859 326 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 PMP2P02689 132 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 GLAP06280 429 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 GALP22466 123 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 HLA-DMAP28067 261 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 FXYD4P59646 89 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 SLC35E3Q7Z769 313 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 LYSMD2Q8IV50 215 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 H1FOOQ8IZA3 346 aaPredicted RBP4.46□□□□□ -1.7
CPNE3-208ENST00000614678 OR2T10Q8NGZ9 312 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 MS4A10Q96PG2 267 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 MIXL1Q9H2W2 232 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 PARP11Q9NR21 331 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 BATF3Q9NR55 127 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 CCL28Q9NRJ3 127 aa4.46□□□□□ -1.7
CPNE3-208ENST00000614678 RAB29O14966 203 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CSF1P09603 554 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 ALDH3B2P48448 385 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CCDC144NLQ6NUI1 221 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 TPRA1Q86W33 373 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CLVS1Q8IUQ0 354 aaPredicted RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 LAX1Q8IWV1 398 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 OR10J5Q8NHC4 309 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CABLES2Q9BTV7 478 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 KLK11Q9UBX7 282 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 A0A1B0GW64 132 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 TCRBV4S1A1TA0A5B7 111 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 PSMB11A5LHX3 300 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 LANCL1O43813 399 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 TUSC2O75896 110 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 IGHV3-11P01762 117 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 AADACP22760 399 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CD1BP29016 333 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 TAS2R20P59543 309 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 GNB1P62873 340 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CX3CL1P78423 397 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 KIAA0141Q14154 515 aaPredicted RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 TMEM17Q86X19 198 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 BVESQ8NE79 360 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 LFNGQ8NES3 379 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 SGMS2Q8NHU3 365 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 ABHD1Q96SE0 405 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 GINS4Q9BRT9 223 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 DCSTAMPQ9H295 470 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 GNB4Q9HAV0 340 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 S4R3C0 116 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms