RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PPP1R1AQ13522 171 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 C4orf46Q504U0 113 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 CT45A1Q5HYN5 189 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 FAM120AOSQ5T036 256 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 UTF1Q5T230 341 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 ZNF626Q68DY1 528 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 C11orf88Q6PI97 169 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 BTNL3Q6UXE8 466 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 KCTD9Q7L273 389 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 LYG2Q86SG7 212 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 DRAM1Q8N682 238 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-212ENST00000613856 OR9G1Q8NH87 305 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 CT45A3Q8NHU0 189 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 ZNF431Q8TF32 576 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-212ENST00000613856 CHAC2Q8WUX2 184 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 CAPSLQ8WWF8 208 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 RTN4IP1Q8WWV3 396 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-212ENST00000613856 GALNT14Q96FL9 552 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 SUCNR1Q9BXA5 334 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 SIRPDQ9H106 197 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 NAA60Q9H7X0 242 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 METTL8Q9H825 291 aaKnown RBP9.32□□□□□ -0.92
SLIRP-212ENST00000613856 BEX1Q9HBH7 125 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 KCNS2Q9ULS6 477 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 PSG11Q9UQ72 335 aa9.32□□□□□ -0.92
SLIRP-212ENST00000613856 hCG_2014768A0A024R1R8 64 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 C9orf170A2RU37 121 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 B3GALNT1O75752 331 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 SFT2D2O95562 160 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
SLIRP-212ENST00000613856 MSMBP08118 114 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 AKR1C4P17516 323 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 GPR12P47775 334 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 GNG10P50151 68 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 BCAP31P51572 246 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 ZNF137PP52743 207 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 DVL1P1P54792 670 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-212ENST00000613856 SUPT4H1P63272 117 aaKnown RBP9.31□□□□□ -0.92
SLIRP-212ENST00000613856 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-212ENST00000613856 PHLDA2Q53GA4 152 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 FAM71F2Q6NXP2 309 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 SGPP2Q8IWX5 399 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 CADM3Q8N126 398 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 BEND2Q8NDZ0 799 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 LEAP2Q969E1 77 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 C5orf30Q96GV9 206 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 OR51J1Q9H342 316 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 MMP26Q9NRE1 261 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 PIPOXQ9P0Z9 390 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 INSIG2Q9Y5U4 225 aa9.31□□□□□ -0.92
SLIRP-212ENST00000613856 A0A0B4J2A0 478 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 TEX13DA0A0J9YY54 714 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 B4DSR2 109 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 J3QR06 171 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 RAB29O14966 203 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 MPPED1O15442 326 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 DUS4LO95620 317 aaKnown RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 IGLV1-47P01700 117 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 ANXA3P12429 323 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 MMP9P14780 707 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 GATA3P23771 443 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 ARF6P62330 175 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 PAX8Q06710 450 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 NCR3LG1Q68D85 454 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 CYB5R2Q6BCY4 276 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 ZNF66Q6ZN08 573 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 TBC1D26Q86UD7 250 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 ODF3L1Q8IXM7 274 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 ABHD12Q8N2K0 398 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 OR52B4Q8NGK2 314 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 OR13D1Q8NGV5 346 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 MITD1Q8WV92 249 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 MSI2Q96DH6 328 aaKnown RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 HSD17B10Q99714 261 aaKnown RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 FAM212BQ9NTI7 297 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 LIN7CQ9NUP9 197 aaKnown RBP9.3□□□□□ -0.92
SLIRP-212ENST00000613856 SDHAF2Q9NX18 166 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 SHPKQ9UHJ6 478 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 RNF150Q9ULK6 438 aa9.3□□□□□ -0.92
SLIRP-212ENST00000613856 SAA2-SAA4A0A096LPE2 208 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 TRAV20A0A0B4J274 112 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 ODF3BA8MYP8 253 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 H0Y980 276 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 IGHV3-7P01780 117 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-212ENST00000613856 VAMP1P23763 118 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 F2RP25116 425 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 IL3RAP26951 378 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 PRRX1P54821 245 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 RRAS2P62070 204 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-212ENST00000613856 SRPXP78539 464 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 CATR1Q13166 79 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms