RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 PXMP4Q9Y6I8 212 aa17.33■□□□□ 0.37
CTDP1-208ENST00000613122 DSPPQ9NZW4 1301 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 J3QW42 95 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 ZNF253O75346 499 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 PMS2P11Q13670 270 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 SLC35E4Q6ICL7 350 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 GSX1Q9H4S2 264 aaPredicted RBP17.33■□□□□ 0.36
CTDP1-208ENST00000613122 RD3LP0DJH9 198 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 PTGDSP41222 190 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM45BQ96B21 275 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM186Q96B77 213 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 NEURL2Q9BR09 285 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM56-RWDD3S4R434 201 aa17.33■□□□□ 0.36
CTDP1-208ENST00000613122 IGHMP01871 453 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 VWA1Q6PCB0 445 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 DPPA3Q6W0C5 159 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 SYT8Q8NBV8 401 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 HIST1H1BP16401 226 aaKnown RBP17.32■□□□□ 0.36
CTDP1-208ENST00000613122 RAX2Q96IS3 184 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 CHCHD2Q9Y6H1 151 aaPredicted RBP17.32■□□□□ 0.36
CTDP1-208ENST00000613122 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 LINC00869P0C866 280 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 CXCL3P19876 107 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 CSRP1P21291 193 aaKnown RBP17.32■□□□□ 0.36
CTDP1-208ENST00000613122 HLA-DRB5Q30154 266 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 OR52M1Q8NGK5 317 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 ISLRO14498 428 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 LMX1BO60663 402 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 CELA3AP09093 270 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 COMPP49747 757 aaPredicted RBP17.32■□□□□ 0.36
CTDP1-208ENST00000613122 HIST3H3Q16695 136 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 LRRC75AQ8NAA5 344 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 IGKV1D-42A0A075B6H8 117 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 OR2D3Q8NGH3 330 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 RAXQ9Y2V3 346 aa17.32■□□□□ 0.36
CTDP1-208ENST00000613122 TRAV30A0A087WSZ9 112 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 B4DEV8 164 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 ATP6V0CP27449 155 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 CLDN18P56856 261 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 C10orf128Q5T292 105 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 SUCLG1P53597 346 aaKnown RBP17.31■□□□□ 0.36
CTDP1-208ENST00000613122 CXorf66Q5JRM2 361 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-208ENST00000613122 APCDD1LQ8NCL9 501 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 OR10D4PQ8NGN7 298 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 POM121Q96HA1 1249 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM222Q9H0R3 208 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 GLRXP35754 106 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 PPOXP50336 477 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 MMP9P14780 707 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 SCGB1D4Q6XE38 83 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 DNM1P46Q6ZS02 220 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
CTDP1-208ENST00000613122 MYOZ3Q8TDC0 251 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM140Q9NV12 185 aa17.31■□□□□ 0.36
CTDP1-208ENST00000613122 OR2A4O95047 310 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM183BQ1AE95 376 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 CHAC2Q8WUX2 184 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 LEAP2Q969E1 77 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 OR2A7Q96R45 310 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 RBKSQ9H477 322 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 ZNF430Q9H8G1 570 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-208ENST00000613122 PGLYRP1O75594 196 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-208ENST00000613122 SEC11BP0C7V7 166 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 NEU4Q8WWR8 484 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM189A5PLL7 270 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 MPDU1O75352 247 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 GTF2H5Q6ZYL4 71 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 DUX5Q96PT3 197 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 WFDC6Q9BQY6 131 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 MAP1LC3CQ9BXW4 147 aa17.3■□□□□ 0.36
CTDP1-208ENST00000613122 DLK1P80370 383 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 AWAT1Q58HT5 328 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 IL22RA2Q969J5 263 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 SLC25A33Q9BSK2 321 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 RND2P52198 227 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 CEBPEQ15744 281 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 LGALSLQ3ZCW2 172 aaPredicted RBP17.29■□□□□ 0.36
CTDP1-208ENST00000613122 LRP11Q86VZ4 500 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 OR4C13Q8NGP0 309 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM191AQ9H0A3 160 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 UBE2L6O14933 153 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 GLIPR1P48060 266 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 BPIFA4PQ86YQ2 179 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 OR4B1Q8NGF8 309 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 TNFSF10P50591 281 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 TWIST1Q15672 202 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 C1orf100Q5SVJ3 147 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 OR11H7Q8NGC8 314 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 LYRM7Q5U5X0 104 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 LYRM2Q9NU23 88 aaPredicted RBP17.29■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM106BQ9NUM4 274 aa17.29■□□□□ 0.36
CTDP1-208ENST00000613122 CGB1A6NKQ9 187 aa17.28■□□□□ 0.36
CTDP1-208ENST00000613122 GCM2O75603 506 aaPredicted RBP17.28■□□□□ 0.36
CTDP1-208ENST00000613122 SNRPCP09234 159 aaKnown RBP17.28■□□□□ 0.36
CTDP1-208ENST00000613122 FCGR2BP31994 310 aaPredicted RBP17.28■□□□□ 0.36
CTDP1-208ENST00000613122 ELOBQ15370 118 aa17.28■□□□□ 0.36
CTDP1-208ENST00000613122 HSF4Q9ULV5 492 aa17.28■□□□□ 0.36
CTDP1-208ENST00000613122 FADS6Q8N9I5 356 aa17.28■□□□□ 0.36
CTDP1-208ENST00000613122 EEF1AKMT3Q96AZ1 226 aa17.28■□□□□ 0.36
CTDP1-208ENST00000613122 TMEM204Q9BSN7 226 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms