RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CHD8Q9HCK8 2581 aa12.35□□□□□ -0.43
CDH1-213ENST00000612417 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 ZNF729A6NN14 1252 aaPredicted RBP12.34□□□□□ -0.43
CDH1-213ENST00000612417 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
CDH1-213ENST00000612417 NXPH2O95156 264 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 FBP1P09467 338 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 SELEP16581 610 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 PRR30Q53SZ7 412 aaPredicted RBP12.34□□□□□ -0.43
CDH1-213ENST00000612417 HEPN1Q6WQI6 88 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 DRAM1Q8N682 238 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 ZNF525Q8N782 197 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 RAB39BQ96DA2 213 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 MUCL1Q96DR8 90 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 SH3BGRL2Q9UJC5 107 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 NCOR2Q9Y618 2525 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 CDIPTO14735 213 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 IGHV2-70P01814 119 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 CBR1P16152 277 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 HBG1P69891 147 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 HBG2P69892 147 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 DOLPP1Q86YN1 238 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 PRR18Q8N4B5 295 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 KCNS2Q9ULS6 477 aa12.34□□□□□ -0.43
CDH1-213ENST00000612417 LOC102723971A0A1B0GUV8 181 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 A0A1W2PPE3 182 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SPCS3P61009 180 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 ERVS71-1P61550 626 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SERF2P84101 59 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SLC25A24Q6NUK1 477 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SLC35E3Q7Z769 313 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 ZNF429Q86V71 674 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SLC25A40Q8TBP6 338 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SCGB1C1Q8TD33 95 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
CDH1-213ENST00000612417 CXorf65A6NEN9 183 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 CEACAM6P40199 344 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 PSG7Q13046 419 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 LRRC75BQ2VPJ9 315 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 ADAM5Q6NVV9 412 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 NIPSNAP3BQ9BS92 247 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SFXN3Q9BWM7 321 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 TOLLIPQ9H0E2 274 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SEBOXQ9HB31 216 aaPredicted RBP12.33□□□□□ -0.44
CDH1-213ENST00000612417 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
CDH1-213ENST00000612417 SPTA1P02549 2419 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 USF3Q68DE3 2245 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 H0YL77 283 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 HAND1O96004 215 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 METTL15P1P0C7V9 234 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 IAPPP10997 89 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 CEACAM8P31997 349 aaPredicted RBP12.32□□□□□ -0.44
CDH1-213ENST00000612417 UBE2KP61086 200 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 ZNF474Q6S9Z5 364 aaPredicted RBP12.32□□□□□ -0.44
CDH1-213ENST00000612417 ZNF645Q8N7E2 425 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 TVP23CQ96ET8 276 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 RSG1Q9BU20 258 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 MMP24Q9Y5R2 645 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 ZZEF1O43149 2961 aa12.32□□□□□ -0.44
CDH1-213ENST00000612417 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 IFNA17P01571 189 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 BMP5P22003 454 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 TAGLN2P37802 199 aaKnown RBP12.31□□□□□ -0.44
CDH1-213ENST00000612417 DLK1P80370 383 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 EIF4EBP1Q13541 118 aaPredicted RBP12.31□□□□□ -0.44
CDH1-213ENST00000612417 MSMO1Q15800 293 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
CDH1-213ENST00000612417 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 OR5H1A6NKK0 313 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 PSPNO60542 156 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 P0C879 139 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 ZNF16P17020 682 aaPredicted RBP12.31□□□□□ -0.44
CDH1-213ENST00000612417 SLC35E4Q6ICL7 350 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 KLF14Q8TD94 323 aaPredicted RBP12.31□□□□□ -0.44
CDH1-213ENST00000612417 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
CDH1-213ENST00000612417 B4DEV8 164 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 AP4M1O00189 453 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 BCL2P10415 239 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 OR2B8PP59922 312 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 RBPJQ06330 500 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 PMS2P11Q13670 270 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 ZNF726P1Q15940 193 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 TMEM14EPQ6UXP3 125 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 UBALD1Q8TB05 177 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 GALMQ96C23 342 aa12.3□□□□□ -0.44
CDH1-213ENST00000612417 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms