RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM90A23PA8MXZ1 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PAGE4O60829 102 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A15PP0C7V4 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A13PP0C7W8 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A14PP0C7W9 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A24PP0C7X0 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM3BP58499 235 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-207ENST00000612273 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 SDF2L1Q9HCN8 221 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 SEC14L6B5MCN3 397 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 J3QT63 122 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 Q6P435 159 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 SNIP1Q8TAD8 396 aaKnown RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 CDX2Q99626 313 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 GFOD1Q9NXC2 390 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 PCNX2A6NKB5 2137 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 ST8SIA5O15466 376 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 RNFT1Q5M7Z0 435 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 ZNF66Q6ZN08 573 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 C1QL4Q86Z23 238 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 Q8NFD4 153 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 TMEM45BQ96B21 275 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 RIMS4Q9H426 269 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 SMDT1Q9H4I9 107 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 LIN7CQ9NUP9 197 aaKnown RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 VAX2Q9UIW0 290 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 CYB5R3P00387 301 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 CD81P60033 236 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 UBE2NP61088 152 aaKnown RBP11.84□□□□□ -0.51
COL6A1-207ENST00000612273 PPP1CBP62140 327 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 SLC10A1Q14973 349 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 LRRC75BQ2VPJ9 315 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 OR10G4Q8NGN3 311 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 OR10G9Q8NGN4 311 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 OR10G7Q8NGN6 311 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 RTL8AQ9BWD3 113 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 MPC1Q9Y5U8 109 aa11.84□□□□□ -0.51
COL6A1-207ENST00000612273 ADGRG4Q8IZF6 3080 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 TECTAO75443 2155 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 IGKV3D-15A0A087WSY6 115 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 TRAV38-1A0A0B4J264 116 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 OR5B21A6NL26 309 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 IGHEP01854 428 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 CYC1P08574 325 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 RAC2P15153 192 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 EDDM3BP56851 147 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 TNFRSF9Q07011 255 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 P2RY6Q15077 328 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 Q3ZCU0 254 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 NINJ1Q92982 152 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 PATZ1Q9HBE1 687 aaKnown RBP11.83□□□□□ -0.52
COL6A1-207ENST00000612273 KCNIP1Q9NZI2 227 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 PSG11Q9UQ72 335 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 DMXL1Q9Y485 3027 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 A0A087WWC5 75 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 ODAMA1E959 279 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 LRP5LA4QPB2 252 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 H7BYZ3 331 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 RNF224P0DH78 156 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 MPV17P39210 176 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-207ENST00000612273 OR8G1Q15617 311 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 SAXO1Q8IYX7 474 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
COL6A1-207ENST00000612273 ABI3Q9P2A4 366 aa11.83□□□□□ -0.52
COL6A1-207ENST00000612273 DUXBA0A1W2PPF3 345 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 SH2D1BO14796 132 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 CEACAM1P13688 526 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-207ENST00000612273 COL10A1Q03692 680 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 TMEM241Q24JQ0 296 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 BSXQ3C1V8 233 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 TMEM41BQ5BJD5 291 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 STRADBQ9C0K7 418 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 PARLQ9H300 379 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 DMRT1Q9Y5R6 373 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 PCSK5Q92824 1860 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 A0A1B0GUS0 222 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 A0A1B0GV90 55 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 HAND1O96004 215 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 GZMHP20718 246 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-207ENST00000612273 TBC1D28Q2M2D7 210 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 Q6ZS49 121 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 ZNF709Q8N972 641 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 GALMQ96C23 342 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 SIRT7Q9NRC8 400 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 FUT9Q9Y231 359 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 GALR1P47211 349 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 PSG7Q13046 419 aa11.82□□□□□ -0.52
COL6A1-207ENST00000612273 MRGPRGQ86SM5 289 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms