RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 RNF7Q9UBF6 113 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 WIPI2Q9Y4P8 454 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 APCSP02743 223 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 MRPL54Q6P161 138 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 MOGAT3Q86VF5 341 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR2T6Q8NHC8 308 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 SAP25Q8TEE9 199 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 LINC00470Q9BZP3 86 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 TMEM191AQ9H0A3 160 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 PARLQ9H300 379 aa9.36□□□□□ -0.91
CDC42EP3-206ENST00000611976 SCN5AQ14524 2016 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 VENTXO95231 258 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 CTSSP25774 331 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 UCP2P55851 309 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 NRN1LQ496H8 165 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 ZNF343Q6P1L6 599 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TMEM108Q6UXF1 575 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 RTN4RQ9BZR6 473 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 BARX1Q9HBU1 254 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TMEM56-RWDD3S4R434 201 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 THSD7BQ9C0I4 1608 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TRPM7Q96QT4 1865 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 A0A1W2PQM1 296 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 J3QW42 95 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 MGST3O14880 152 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 RBP4P02753 201 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 HOXA5P20719 270 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 PRDX2P32119 198 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 IGLV3-32A0A0A0MS00 114 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TRAV38-1A0A0B4J264 116 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 IGKV1-9A0A0C4DH69 117 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 AGFG2O95081 481 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TIAF1O95411 115 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 CD5P06127 495 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 HIST1H1EP10412 219 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 WDR25Q64LD2 544 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 REC114Q7Z4M0 266 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TMEM251Q8N6I4 163 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 FAM122AQ96E09 287 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 RCC1LQ96I51 464 aaKnown RBP9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 RHOVQ96L33 236 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR51B2Q9Y5P1 312 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 UNC13CQ8NB66 2214 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 A0A0A6YYD4 124 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 J3QR06 171 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 AGAP20933 346 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 CFPP27918 469 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 WDFY1Q8IWB7 410 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR5P3Q8WZ94 311 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 FAM117AQ9C073 453 aa9.35□□□□□ -0.91
CDC42EP3-206ENST00000611976 IGLV3-12A0A075B6K2 115 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 TRBV23-1A0A0A0MS06 115 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 UBE2CO00762 179 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 ISLRO14498 428 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 MNX1P50219 401 aaPredicted RBP9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 LHFPL1Q86WI0 220 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 CLDND2Q8NHS1 167 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 TIMP4Q99727 224 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 ABHD14AQ9BUJ0 271 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 CYTL1Q9NRR1 136 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 LRRC3CA6NJW4 275 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 J3QR89 54 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 ORM2P19652 201 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 HES3Q5TGS1 186 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR1L1Q8NH94 360 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR2V2Q96R30 315 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 MKRN2OSH3BPM6 223 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 SLC31A2O15432 143 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 LRRC75BQ2VPJ9 315 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 ZNF596Q8TC21 504 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 PERPQ96FX8 193 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 TDRD6O60522 2096 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 P01737 135 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 PRRX1P54821 245 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR10S1Q8NGN2 331 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR1L8Q8NGR8 309 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 PRSS3P2Q8NHM4 247 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 IL36RNQ9UBH0 155 aa9.34□□□□□ -0.91
CDC42EP3-206ENST00000611976 STARD6P59095 220 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 CYP2G1PQ6ZSU1 146 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 LRTM2Q8N967 370 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 RPEQ96AT9 228 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 K7ESF4 209 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZG16O60844 167 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 SMPD2O60906 423 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 HIST3H3Q16695 136 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 PET117Q6UWS5 81 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 DRAM1Q8N682 238 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms