RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 OR5H8P0DN80 308 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 CD33P20138 364 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 CBX3Q13185 183 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 SRSF7Q16629 238 aaKnown RBP eCLIP10.57□□□□□ -0.72
SENP3-209ENST00000610454 PNLIPRP3Q17RR3 467 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 IGSF11Q5DX21 431 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 CXorf66Q5JRM2 361 aaPredicted RBP10.57□□□□□ -0.72
SENP3-209ENST00000610454 GLDNQ6ZMI3 551 aaPredicted RBP10.57□□□□□ -0.72
SENP3-209ENST00000610454 C1QL4Q86Z23 238 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.57□□□□□ -0.72
SENP3-209ENST00000610454 ST6GALNAC5Q9BVH7 336 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
SENP3-209ENST00000610454 TRBV6-7A0A0A0MS04 114 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 A0A0A6YYH2 397 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 A6NJ64 397 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 H0YJW9 148 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 M0R1X1 148 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 OR8U9P0C7N5 309 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 CT45A6P0DMU7 189 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 CT45A5P0DMU8 189 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 CT45A7P0DMV0 189 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 CNTFRP26992 372 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 LSM3P62310 102 aaKnown RBP10.56□□□□□ -0.72
SENP3-209ENST00000610454 C5orf64Q2M2E5 130 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 LIN54Q6MZP7 749 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 Q6ZS49 121 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 DRAXINQ8NBI3 349 aaPredicted RBP10.56□□□□□ -0.72
SENP3-209ENST00000610454 OR8U1Q8NH10 309 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 NUDCD2Q8WVJ2 157 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 RBMXL1Q96E39 390 aaKnown RBP10.56□□□□□ -0.72
SENP3-209ENST00000610454 HSPB9Q9BQS6 159 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 DCSTAMPQ9H295 470 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 PARP11Q9NR21 331 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 DIABLOQ9NR28 239 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 ZFP57Q9NU63 452 aa10.56□□□□□ -0.72
SENP3-209ENST00000610454 HLA-DRB1P01911 266 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 CTXN2P0C2S0 81 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 SLC6A1P30531 599 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 RPL23AP62750 156 aaKnown RBP10.55□□□□□ -0.72
SENP3-209ENST00000610454 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 KLHL30-AS1Q8NEE0 82 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 NPBQ8NG41 125 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 OR5AN1Q8NGI8 311 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 OR5H6Q8NGV6 325 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 ABHD5Q8WTS1 349 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 YIPF6Q96EC8 236 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 TSNAXQ99598 290 aaKnown RBP10.55□□□□□ -0.72
SENP3-209ENST00000610454 RNF5Q99942 180 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 TOLLIPQ9H0E2 274 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 ELF5Q9UKW6 265 aaPredicted RBP10.55□□□□□ -0.72
SENP3-209ENST00000610454 SPATA2Q9UM82 520 aa10.55□□□□□ -0.72
SENP3-209ENST00000610454 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 G3V4G9 280 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 RRHO14718 337 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 NDUFA3O95167 84 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 IGF1P05019 195 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 ARPC4P59998 168 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 RPS16P62249 146 aaKnown RBP10.54□□□□□ -0.72
SENP3-209ENST00000610454 FOXE3Q13461 319 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 ZNF260Q3ZCT1 412 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 TMEM65Q6PI78 240 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
SENP3-209ENST00000610454 SLC25A38Q96DW6 304 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 RITA1Q96K30 269 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 OR51J1Q9H342 316 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 SLC35D1Q9NTN3 355 aa10.54□□□□□ -0.72
SENP3-209ENST00000610454 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 SPDEFO95238 335 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 ELANEP08246 267 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 TGFBR1P36897 503 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 THBS3P49746 956 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 TAGLNQ01995 201 aaKnown RBP10.53□□□□□ -0.72
SENP3-209ENST00000610454 RTL8BQ17RB0 113 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 CNIH2Q6PI25 160 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 ZNF695Q8IW36 515 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 H1FOOQ8IZA3 346 aaPredicted RBP10.53□□□□□ -0.72
SENP3-209ENST00000610454 ZNF383Q8NA42 475 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 S100A16Q96FQ6 103 aaKnown RBP10.53□□□□□ -0.72
SENP3-209ENST00000610454 ADTRPQ96IZ2 230 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 FBXL15Q9H469 300 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 SDHAF2Q9NX18 166 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
SENP3-209ENST00000610454 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 GAB2Q9UQC2 676 aa10.53□□□□□ -0.72
SENP3-209ENST00000610454 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.72
SENP3-209ENST00000610454 IGKV1D-8A0A087WSZ0 117 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 IGHV7-81A0A0B4J1V7 117 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 TRAV41A0A0B4J266 112 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 IGHG4P01861 327 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 IGKV1-16P04430 117 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 RRASP10301 218 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 RPS19P39019 145 aaKnown RBP10.52□□□□□ -0.73
SENP3-209ENST00000610454 LUMP51884 338 aaPredicted RBP10.52□□□□□ -0.73
SENP3-209ENST00000610454 UBE2NLQ5JXB2 153 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 FUNDC2Q9BWH2 189 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 ANXA10Q9UJ72 324 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 WSB1Q9Y6I7 421 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms