RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MRGPRDQ8TDS7 321 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 CT55Q8WUE5 264 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 SPSB4Q96A44 273 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 S1PR2O95136 353 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 SCGB1D1O95968 90 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 CTXN2P0C2S0 81 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 PSMB3P49720 205 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 RIPPLY2Q5TAB7 128 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 FAM78BQ5VT40 261 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 MRGPRGQ86SM5 289 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 ABCA1O95477 2261 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 GABRA2P47869 451 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 TCF23Q7RTU1 214 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 TGIF2LXQ8IUE1 241 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 OR4A8P0C604 315 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 EDDM3AQ14507 147 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 OPN1MWP04001 364 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 OPN1MW2P0DN77 364 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 OPN1MW3P0DN78 364 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 CEACAM1P13688 526 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 PKIAP61925 76 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 MDP1Q86V88 176 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 ZNF573Q86YE8 665 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 OR5A2Q8NGI9 324 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 RAB24Q969Q5 203 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 MSL2Q9HCI7 577 aa17.22■□□□□ 0.35
SSBP3-216ENST00000610401 MPLP40238 635 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 THBS3P49746 956 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 GFRA1P56159 465 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 OR1P1Q8NH06 330 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 POM121L2Q96KW2 1035 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 PITPNC1Q9UKF7 332 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 GRIFINA4D1Z8 144 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 C17orf98A8MV24 154 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 SPINK4O60575 86 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 LYZL6O75951 148 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 IFNA1P01562 189 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 COLCA1Q6ZS62 124 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 WDR86Q86TI4 376 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 NAT8Q9UHE5 227 aa17.21■□□□□ 0.35
SSBP3-216ENST00000610401 PSPNO60542 156 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 OR8G1Q15617 311 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 SCCPDHQ8NBX0 429 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 HEATR1Q9H583 2144 aaKnown RBP17.2■□□□□ 0.34
SSBP3-216ENST00000610401 KRTAP27-1Q3LI81 207 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 ATP1A1-AS1Q5TC04 95 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 ABHD17BQ5VST6 288 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 OBP2BQ9NPH6 170 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 CBLN4Q9NTU7 201 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 PILRBQ9UKJ0 227 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 ELOA3CA0A087WX78 387 aaPredicted RBP17.2■□□□□ 0.34
SSBP3-216ENST00000610401 GYPAP02724 150 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 SSTR5P35346 364 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 ATP5G3P48201 142 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 SSX2Q16385 188 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 ZNF709Q8N972 641 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 OR2M7Q8NG81 312 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 OR51I2Q9H344 312 aa17.2■□□□□ 0.34
SSBP3-216ENST00000610401 ZNF320A2RRD8 509 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 SELLP14151 372 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 TNFRSF9Q07011 255 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 PNRC1Q12796 327 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-216ENST00000610401 KIAA1549Q9HCM3 1950 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 ODAMA1E959 279 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 ST8SIA5O15466 376 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 LHX2P50458 406 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 DCAF12Q5T6F0 453 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 OR8G5Q8NG78 346 aa17.19■□□□□ 0.34
SSBP3-216ENST00000610401 BOKQ9UMX3 212 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-216ENST00000610401 B4DEV8 164 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 NDUFB4O95168 129 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 C1QTNF9P0C862 333 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 REC114Q7Z4M0 266 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 TMEM183AQ8IXX5 376 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 TMEM256Q8N2U0 113 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 CASP6P55212 293 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 OR1C1Q15619 314 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 TECTBQ96PL2 329 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 LIN7CQ9NUP9 197 aaKnown RBP17.18■□□□□ 0.34
SSBP3-216ENST00000610401 C11orf94C9JXX5 98 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 AGFG2O95081 481 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 Q3ZCU0 254 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 SP5Q6BEB4 398 aaPredicted RBP17.18■□□□□ 0.34
SSBP3-216ENST00000610401 LOXL2Q9Y4K0 774 aa17.18■□□□□ 0.34
SSBP3-216ENST00000610401 NEURL1O76050 574 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 ASPHD1Q5U4P2 390 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 OR10P1Q8NGE3 313 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 IL22RA2Q969J5 263 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 IMMP2LQ96T52 175 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 EREGO14944 169 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 PFN1P07737 140 aaKnown RBP17.17■□□□□ 0.34
SSBP3-216ENST00000610401 CLDN18P56856 261 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 ARG2P78540 354 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 BATFQ16520 125 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 TMEM251Q8N6I4 163 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 GTF3AQ92664 365 aaKnown RBP17.17■□□□□ 0.34
SSBP3-216ENST00000610401 TTTY12Q9BZ98 90 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 PSG11Q9UQ72 335 aa17.17■□□□□ 0.34
SSBP3-216ENST00000610401 ZNF705FA8MVS1 300 aaPredicted RBP17.16■□□□□ 0.34
SSBP3-216ENST00000610401 ZNF705DP0CH99 300 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms