RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 WDR25Q64LD2 544 aaPredicted RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 SLC25A48Q6ZT89 311 aaKnown RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 TMUB2Q71RG4 321 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 INO80EQ8NBZ0 244 aaPredicted RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 IGFBPL1Q8WX77 278 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 DCUN1D4Q92564 292 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 LSM10Q969L4 123 aaKnown RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 ZFP57Q9NU63 452 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 ARID1AO14497 2285 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 A0A0D9SG52 128 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 LINC00473A8K010 186 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 OR2F2O95006 317 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 MBPP02686 304 aaPredicted RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 RLN2P04090 185 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 GPR6P46095 362 aaPredicted RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 GNG10P50151 68 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 OR2F1Q13607 317 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 RPL39P5Q59GN2 51 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 THOC7Q6I9Y2 204 aaKnown RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 ACOT7LQ6ZUV0 252 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 SPAG16Q8N0X2 631 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 OR4D5Q8NGN0 318 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 ARL6Q9H0F7 186 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 HEXA-AS1Q9H8Q6 139 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 PATZ1Q9HBE1 687 aaKnown RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 OR5AC2Q9NZP5 309 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 MALRD1Q5VYJ5 2156 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 YLPM1P49750 1951 aaKnown RBP17.71■□□□□ 0.43
USP6NL-204ENST00000606752 C17orf98A8MV24 154 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 M0R1X1 148 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 SCGB1D2O95969 90 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 AP2S1P53680 142 aaPredicted RBP17.71■□□□□ 0.43
USP6NL-204ENST00000606752 BRWD1-AS2P59051 145 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 ZNF345Q14585 488 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 SMCO1Q147U7 214 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 FAM219AQ8IW50 185 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 FOXRED2Q8IWF2 684 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 OR1S1Q8NH92 325 aa17.71■□□□□ 0.43
USP6NL-204ENST00000606752 RNF222A6NCQ9 220 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 RAMP3O60896 148 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 SLC25A6P12236 298 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 LINC00205P59089 165 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 NCR3LG1Q68D85 454 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 ODF3L1Q8IXM7 274 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 LYG1Q8N1E2 194 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 C8orf46Q8TAG6 207 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 CD300LFQ8TDQ1 290 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 GPR146Q96CH1 333 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 A0A1B0GU03 582 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 A0A1W2PPH5 198 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 DEDDO75618 318 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 OR2B11Q5JQS5 317 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 KCNRGQ8N5I3 272 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 C11orf42Q8N5U0 333 aa17.7■□□□□ 0.42
USP6NL-204ENST00000606752 RNASE11Q8TAA1 199 aaKnown RBP17.7■□□□□ 0.42
USP6NL-204ENST00000606752 RRNAD1Q96FB5 475 aaKnown RBP17.7■□□□□ 0.42
USP6NL-204ENST00000606752 LSM5Q9Y4Y9 91 aaKnown RBP17.7■□□□□ 0.42
USP6NL-204ENST00000606752 SAA2-SAA4A0A096LPE2 208 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 A0A0G2JRQ6 117 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 K7EPK0 472 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 ST8SIA3O43173 380 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 IGKV1-5P01602 117 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 SAA2P0DJI9 122 aaPredicted RBP17.69■□□□□ 0.42
USP6NL-204ENST00000606752 AKR1C2P52895 323 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 C1orf229Q6ZS94 237 aaPredicted RBP17.69■□□□□ 0.42
USP6NL-204ENST00000606752 FAM71E2Q8N5Q1 922 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 ZNF251Q9BRH9 671 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 PAIP2BQ9ULR5 123 aaKnown RBP17.69■□□□□ 0.42
USP6NL-204ENST00000606752 DCHS2Q6V1P9 2916 aa17.69■□□□□ 0.42
USP6NL-204ENST00000606752 UBR5O95071 2799 aaPredicted RBP17.69■□□□□ 0.42
USP6NL-204ENST00000606752 PPIAL4CA0A0B4J2A2 164 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 F5H0A9 414 aaPredicted RBP17.68■□□□□ 0.42
USP6NL-204ENST00000606752 ATG12O94817 140 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 PPIAL4GP0DN37 164 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 IGHV1-8P0DP01 117 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 GNB2P62879 340 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 ZNF816Q0VGE8 651 aaPredicted RBP17.68■□□□□ 0.42
USP6NL-204ENST00000606752 SP5Q6BEB4 398 aaPredicted RBP17.68■□□□□ 0.42
USP6NL-204ENST00000606752 C8orf31Q8N9H6 132 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 CCL19Q99731 98 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 POMT1Q9Y6A1 747 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 DOCK11Q5JSL3 2073 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 A0A087X0M5 115 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 A0A1B0GX30 115 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 COX6B1P14854 86 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 NUP62P37198 522 aaPredicted RBP17.68■□□□□ 0.42
USP6NL-204ENST00000606752 NKX2-1P43699 371 aaPredicted RBP17.68■□□□□ 0.42
USP6NL-204ENST00000606752 PRELID3BQ9Y3B1 194 aa17.68■□□□□ 0.42
USP6NL-204ENST00000606752 AKAP6Q13023 2319 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 KCNAB3O43448 404 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 PITX3O75364 302 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 LINC00311Q8N616 119 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 LY6G5BQ8NDX9 201 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 OR8H1Q8NGG4 311 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 S1PR3Q99500 378 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 NARFLQ9H6Q4 476 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 SESN1Q9Y6P5 492 aa17.67■□□□□ 0.42
USP6NL-204ENST00000606752 RBFOX2O43251 390 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP6NL-204ENST00000606752 S1PR2O95136 353 aa17.66■□□□□ 0.42
USP6NL-204ENST00000606752 RBP4P02753 201 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms