RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ANKRD65E5RJM6 399 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 H7C2Y5 167 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 OVOL1O14753 267 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 HSPA12AO43301 675 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 RBBP9O75884 186 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 HSMCR30P0CW71 290 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 SNRPBP14678 240 aaKnown RBP5.89□□□□□ -1.47
CUX1-219ENST00000606749 CPEP16870 476 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 CHRNA7P36544 502 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 VEGFCP49767 419 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 SLURP1P55000 103 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 LINC00205P59089 165 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 RPS25P62851 125 aaKnown RBP5.89□□□□□ -1.47
CUX1-219ENST00000606749 HLA-DRB3P79483 266 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 PLGLAQ15195 96 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 PSG5Q15238 335 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 TRAM1Q15629 374 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 RAB11BQ15907 218 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 ECSCRQ19T08 205 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 C2orf76Q3KRA6 126 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 AKIRIN2Q53H80 203 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 CD200R1LQ6Q8B3 271 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 ZNF562Q6V9R5 426 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 PPP1R27Q86WC6 154 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 TCTEX1D1Q8N7M0 179 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 ZNF383Q8NA42 475 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 DRAXINQ8NBI3 349 aaPredicted RBP5.89□□□□□ -1.47
CUX1-219ENST00000606749 NRG4Q8WWG1 115 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 EDARADDQ8WWZ3 215 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 ARHGAP5-AS1Q96IT6 56 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 CLCC1Q96S66 551 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 PECRQ9BY49 303 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 PLGRKTQ9HBL7 147 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 ISYNA1Q9NPH2 558 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 MGAT4AQ9UM21 535 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 GAB2Q9UQC2 676 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 WASHC3Q9Y3C0 194 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 TPRKBQ9Y3C4 175 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 SMAD5-AS1Q9Y6J3 95 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 A3GALT2U3KPV4 340 aa5.89□□□□□ -1.47
CUX1-219ENST00000606749 IGHV4OR15-8A0A075B7B6 117 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 A0A087WW49 117 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 IGKV1-6A0A0C4DH72 117 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 TRDCB7Z8K6 153 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 LINC01619G3V211 115 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 LDLRAD4O15165 306 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 ARL6IP5O75915 188 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 LY86O95711 162 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 IGKV1-16P04430 117 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 HSPB1P04792 205 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 LGALS1P09382 135 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 AQP4P55087 323 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 CLDN12P56749 244 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 RPS16P62249 146 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 FABP5Q01469 135 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 MLLT11Q13015 90 aaPredicted RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 ACTBL2Q562R1 376 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 PLAC9Q5JTB6 97 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 PYHIN1Q6K0P9 492 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 ACSM6Q6P461 480 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 UNQ5815/PRO19632Q6UWF5 114 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 LFNGQ8NES3 379 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 ABHD5Q8WTS1 349 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 FAM3DQ96BQ1 224 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 RHOVQ96L33 236 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 MS4A10Q96PG2 267 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 TSNAXQ99598 290 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 CMSS1Q9BQ75 279 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 FAM103A1Q9BTL3 118 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 C12orf4Q9NQ89 552 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 METTL1Q9UBP6 276 aaKnown RBP5.88□□□□□ -1.47
CUX1-219ENST00000606749 ZNF221Q9UK13 617 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 RAB22AQ9UL26 194 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 KCNK7Q9Y2U2 307 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 V9GY05 133 aa5.88□□□□□ -1.47
CUX1-219ENST00000606749 TMEM272A0A1B0GTI8 110 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 DENRO43583 198 aaKnown RBP5.87□□□□□ -1.47
CUX1-219ENST00000606749 RGS10O43665 173 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 SAP30O75446 220 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 CA2P00918 260 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 IGHV3-11P01762 117 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 TFAP2AP05549 437 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 SPNP16150 400 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 CRHBPP24387 322 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 PSMA1P25786 263 aaKnown RBP5.87□□□□□ -1.47
CUX1-219ENST00000606749 CALRP27797 417 aaKnown RBP5.87□□□□□ -1.47
CUX1-219ENST00000606749 CD40LGP29965 261 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 RANBP1P43487 201 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 PSMD7P51665 324 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 PLA2G7Q13093 441 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 FXYD3Q14802 87 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 PRSS48Q7RTY5 328 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 PDPNQ86YL7 162 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 SBSPONQ8IVN8 264 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.87□□□□□ -1.47
CUX1-219ENST00000606749 OR56B1Q8NGI3 324 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 FLYWCH2Q96CP2 140 aaKnown RBP5.87□□□□□ -1.47
CUX1-219ENST00000606749 MGLLQ99685 303 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 CCDC90BQ9GZT6 254 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 ACOT13Q9NPJ3 140 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms