RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 CELP19835 753 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 CEACAM6P40199 344 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 LGALS7P47929 136 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 VEGFCP49767 419 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 RPS16P62249 146 aaKnown RBP7.37□□□□□ -1.23
VRK3-224ENST00000601849 RPS11P62280 158 aaKnown RBP eCLIP7.37□□□□□ -1.23
VRK3-224ENST00000601849 ST3GAL4Q11206 333 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 PQLC1Q8N2U9 271 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 MS4A15Q8N5U1 240 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 ZFP41Q8N8Y5 198 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 RBMXL1Q96E39 390 aaKnown RBP7.37□□□□□ -1.23
VRK3-224ENST00000601849 PGLYRP3Q96LB9 341 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 DERL3Q96Q80 235 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 FAM103A1Q9BTL3 118 aaKnown RBP7.37□□□□□ -1.23
VRK3-224ENST00000601849 URM1Q9BTM9 101 aaKnown RBP7.37□□□□□ -1.23
VRK3-224ENST00000601849 TMEM59Q9BXS4 323 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 IFI27L2Q9H2X8 130 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 S100A14Q9HCY8 104 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 CLEC2DQ9UHP7 191 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 SORL1Q92673 2214 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 STARD9Q9P2P6 4700 aa7.37□□□□□ -1.23
VRK3-224ENST00000601849 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 H0YJW9 148 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 LALBAP00709 142 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 CA2P00918 260 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 EGR2P11161 476 aaPredicted RBP7.36□□□□□ -1.23
VRK3-224ENST00000601849 MRPS15P82914 257 aaKnown RBP7.36□□□□□ -1.23
VRK3-224ENST00000601849 FXYD3Q14802 87 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 PSG5Q15238 335 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 RPL39P5Q59GN2 51 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 C19orf54Q5BKX5 351 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 SIGIRRQ6IA17 410 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 LCN12Q6JVE5 192 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 GLDNQ6ZMI3 551 aaPredicted RBP7.36□□□□□ -1.23
VRK3-224ENST00000601849 C6orf201Q7Z4U5 140 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 PDPNQ86YL7 162 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 Q8N1Y9 231 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 POC5Q8NA72 575 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 OR5AN1Q8NGI8 311 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 OR9G4Q8NGQ1 327 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 CYGBQ8WWM9 190 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 SULT4A1Q9BR01 284 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 TMED9Q9BVK6 235 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 C8orf4Q9NR00 106 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 C19orf73Q9NVV2 129 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 PEMTQ9UBM1 199 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 NKX1-2Q9UD57 310 aaPredicted RBP7.36□□□□□ -1.23
VRK3-224ENST00000601849 FBXO7Q9Y3I1 522 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 BIRC6Q9NR09 4857 aa7.36□□□□□ -1.23
VRK3-224ENST00000601849 A0A0B4J203 849 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 ANKRD34BA5PLL1 514 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 HTR2CP28335 458 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 WNT4P56705 351 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 RPS27AP62979 156 aaKnown RBP7.35□□□□□ -1.23
VRK3-224ENST00000601849 NDPQ00604 133 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
VRK3-224ENST00000601849 ACSM3Q53FZ2 586 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 Q8N402 240 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 DHRSXQ8N5I4 330 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 OR5T1Q8NG75 326 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 GRPEL2Q8TAA5 225 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 GGHQ92820 318 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 USMG5Q96IX5 58 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 PHB2Q99623 299 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 PEF1Q9UBV8 284 aaKnown RBP7.35□□□□□ -1.23
VRK3-224ENST00000601849 TENM2Q9NT68 2774 aa7.35□□□□□ -1.23
VRK3-224ENST00000601849 AIREO43918 545 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 NAPSAO96009 420 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 SERPINB10P48595 397 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 KLF5Q13887 457 aaPredicted RBP7.34□□□□□ -1.23
VRK3-224ENST00000601849 HAGHQ16775 308 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 RPEL1Q2QD12 228 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 RBM48Q5RL73 367 aaKnown RBP7.34□□□□□ -1.23
VRK3-224ENST00000601849 ZNF880Q6PDB4 577 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 C5orf24Q7Z6I8 188 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 DRAXINQ8NBI3 349 aaPredicted RBP7.34□□□□□ -1.23
VRK3-224ENST00000601849 PHYHIPQ92561 330 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 SNAPC3Q92966 411 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 CENPOQ9BU64 300 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 TM2D1Q9BX74 207 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 C11orf54Q9H0W9 315 aaPredicted RBP7.34□□□□□ -1.23
VRK3-224ENST00000601849 SIGLEC8Q9NYZ4 499 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 GAB2Q9UQC2 676 aa7.34□□□□□ -1.23
VRK3-224ENST00000601849 TRBV6-6A0A0A6YYG2 114 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 MPPED1O15442 326 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 SLC25A17O43808 307 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 ACTL6BO94805 426 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 TPPPO94811 219 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 BRI3O95415 125 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 RRASP10301 218 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 SRMP19623 302 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 SYNJ2BPP57105 145 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 HLA-DRB3P79483 266 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 TPBGQ13641 420 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 HSD17B12Q53GQ0 312 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms