RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 PDCD5O14737 125 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 HSPA12AO43301 675 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 GALP22466 123 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 CRIP2P52943 208 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-209ENST00000601357 NDPQ00604 133 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 MOGAT2Q3SYC2 334 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 UBE2E2Q96LR5 201 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 TOLLIPQ9H0E2 274 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 WASHC3Q9Y3C0 194 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 FBXO7Q9Y3I1 522 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 MRPS14O60783 128 aaKnown RBP17.64■□□□□ 0.41
SSBP4-209ENST00000601357 RBBP9O75884 186 aa17.64■□□□□ 0.41
SSBP4-209ENST00000601357 ZNF491Q8N8L2 437 aa17.64■□□□□ 0.41
SSBP4-209ENST00000601357 OR4A4PQ8NGN8 299 aa17.64■□□□□ 0.41
SSBP4-209ENST00000601357 RAB3CQ96E17 227 aa17.64■□□□□ 0.41
SSBP4-209ENST00000601357 RNF5Q99942 180 aa17.64■□□□□ 0.41
SSBP4-209ENST00000601357 FBXL15Q9H469 300 aa17.64■□□□□ 0.41
SSBP4-209ENST00000601357 I3L521 148 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 ATP6V1G2O95670 118 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 RAB25P57735 213 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 CX3CL1P78423 397 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 RUNX1Q01196 453 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 UBE2UQ5VVX9 321 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 ZNF660Q6AZW8 331 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-209ENST00000601357 TMEM65Q6PI78 240 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 NR2C2APQ86WQ0 139 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 OR5M8Q8NGP6 311 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 GNB4Q9HAV0 340 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 RDH8Q9NYR8 311 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 RNF150Q9ULK6 438 aa17.63■□□□□ 0.41
SSBP4-209ENST00000601357 H7C2Y5 167 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 RAB27BO00194 218 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 MFNGO00587 321 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 FCN1O00602 326 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 FCGR3AP08637 254 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 EGR2P11161 476 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-209ENST00000601357 RAB3BP20337 219 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 RAB6AP20340 208 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 MYL9P24844 172 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 SERPINB10P48595 397 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 ZNF383Q8NA42 475 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 DRAXINQ8NBI3 349 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-209ENST00000601357 OR10R2Q8NGX6 335 aa17.62■□□□□ 0.41
SSBP4-209ENST00000601357 SOX15O60248 233 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 IGKV1-16P04430 117 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 GSTP1P09211 210 aaKnown RBP17.61■□□□□ 0.41
SSBP4-209ENST00000601357 CD3GP09693 182 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 RAB9AP51151 201 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 LUMP51884 338 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-209ENST00000601357 C22orf42Q6IC83 251 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 OR11H1Q8NG94 326 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 CABLES2Q9BTV7 478 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 ZMAT5Q9UDW3 170 aaKnown RBP17.61■□□□□ 0.41
SSBP4-209ENST00000601357 ZNF221Q9UK13 617 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 VSIG4Q9Y279 399 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 NUBP2Q9Y5Y2 271 aa17.61■□□□□ 0.41
SSBP4-209ENST00000601357 FABP7O15540 132 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 DIRAS3O95661 229 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 HIST1H1DP16402 221 aaKnown RBP17.6■□□□□ 0.41
SSBP4-209ENST00000601357 GNB3P16520 340 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 GADD45AP24522 165 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 LINC00205P59089 165 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 DGCR2P98153 550 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 PSG5Q15238 335 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 IGSF11Q5DX21 431 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 DEFB121Q5J5C9 76 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 ASPHD1Q5U4P2 390 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 SPARTQ8N0X7 666 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-209ENST00000601357 DNAH9Q9NYC9 4486 aa17.6■□□□□ 0.41
SSBP4-209ENST00000601357 TRBV6-7A0A0A0MS04 114 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 A0A0B4J203 849 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 SPDEFO95238 335 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 SNRPBP14678 240 aaKnown RBP17.59■□□□□ 0.41
SSBP4-209ENST00000601357 FGF9P31371 208 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-209ENST00000601357 MRPS15P82914 257 aaKnown RBP17.59■□□□□ 0.41
SSBP4-209ENST00000601357 C9orf66Q5T8R8 295 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 PDPNQ86YL7 162 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 TCTEX1D1Q8N7M0 179 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 SCOCQ9UIL1 159 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 GAB2Q9UQC2 676 aa17.59■□□□□ 0.41
SSBP4-209ENST00000601357 FOXA2Q9Y261 457 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-209ENST00000601357 RAMP3O60896 148 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 TFAP2AP05549 437 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 GSTT2P0CG29 244 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 GSTT2BP0CG30 244 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 GNB1P62873 340 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 PLGLAQ15195 96 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 ECSCRQ19T08 205 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 ZNF562Q6V9R5 426 aa17.58■□□□□ 0.4
SSBP4-209ENST00000601357 METTL1Q9UBP6 276 aaKnown RBP17.58■□□□□ 0.4
SSBP4-209ENST00000601357 A0A1W2PN81 502 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 M0R1X1 148 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 BET1O15155 118 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 OR8U8P0C7N1 319 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 CHRNA7P36544 502 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 ZNF616Q08AN1 781 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 SRSF7Q16629 238 aaKnown RBP eCLIP17.57■□□□□ 0.4
SSBP4-209ENST00000601357 Q6ZS49 121 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 OR1N2Q8NGR9 330 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms