RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PROP1O75360 226 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 CLEC2LP0C7M8 214 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 GSTT2P0CG29 244 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 GSTT2BP0CG30 244 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 RPL23AP62750 156 aaKnown RBP13.52□□□□□ -0.25
HERC3-214ENST00000601319 PITPNAQ00169 270 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 CFHR3Q02985 330 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 C5orf64Q2M2E5 130 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 IGSF11Q5DX21 431 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 KHDC1LQ5JSQ8 128 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 TEX38Q6PEX7 206 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 RNF152Q8N8N0 203 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 WFDC9Q8NEX5 89 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 RBMXL1Q96E39 390 aaKnown RBP13.52□□□□□ -0.25
HERC3-214ENST00000601319 YIPF6Q96EC8 236 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 RITA1Q96K30 269 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 DCSTAMPQ9H295 470 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 LINC00527Q9UJ94 153 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 GAB2Q9UQC2 676 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 NOTCH3Q9UM47 2321 aa13.52□□□□□ -0.25
HERC3-214ENST00000601319 A0A0A6YYH2 397 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 A6NJ64 397 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 BET1O15155 118 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 OR5H8P0DN80 308 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 CNTFRP26992 372 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 FOXE3Q13461 319 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 PNLIPRP3Q17RR3 467 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 CDNFQ49AH0 187 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
HERC3-214ENST00000601319 CROCCP3Q8IVE0 287 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 SLC25A38Q96DW6 304 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 RNF5Q99942 180 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 KIAA1456Q9P272 454 aa13.51□□□□□ -0.25
HERC3-214ENST00000601319 ZNF230Q9UIE0 474 aaPredicted RBP13.51□□□□□ -0.25
HERC3-214ENST00000601319 G3V4G9 280 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 AIREO43918 545 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 IGHG4P01861 327 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 TFAP2AP05549 437 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 VDAC1P21796 283 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 ZNF260Q3ZCT1 412 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 GLDNQ6ZMI3 551 aaPredicted RBP13.5□□□□□ -0.25
HERC3-214ENST00000601319 PDPNQ86YL7 162 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 MAFIPQ8WZ33 124 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 OR2D2Q9H210 308 aa13.5□□□□□ -0.25
HERC3-214ENST00000601319 ELF5Q9UKW6 265 aaPredicted RBP13.5□□□□□ -0.25
HERC3-214ENST00000601319 PRKDCP78527 4128 aaKnown RBP13.49□□□□□ -0.25
HERC3-214ENST00000601319 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 IGHV7-81A0A0B4J1V7 117 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 TMEM235A6NFC5 223 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 H7C2Y5 167 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 RRHO14718 337 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 SPDEFO95238 335 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 PF4P02776 101 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 ELANEP08246 267 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 IDNKQ5T6J7 187 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 C1QL4Q86Z23 238 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 H1FOOQ8IZA3 346 aaPredicted RBP13.49□□□□□ -0.25
HERC3-214ENST00000601319 ZNF383Q8NA42 475 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 GINS4Q9BRT9 223 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 OR51J1Q9H342 316 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 RNF150Q9ULK6 438 aa13.49□□□□□ -0.25
HERC3-214ENST00000601319 APOA2P02652 100 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 CTXN2P0C2S0 81 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 OR8U9P0C7N5 309 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 CD33P20138 364 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 CRIP2P52943 208 aaPredicted RBP13.48□□□□□ -0.25
HERC3-214ENST00000601319 CXorf66Q5JRM2 361 aaPredicted RBP13.48□□□□□ -0.25
HERC3-214ENST00000601319 LIN54Q6MZP7 749 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 ETV3LQ6ZN32 361 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 OR5H6Q8NGV6 325 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 OR8U1Q8NH10 309 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 NUDCD2Q8WVJ2 157 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 SPATA2Q9UM82 520 aa13.48□□□□□ -0.25
HERC3-214ENST00000601319 M0R1X1 148 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 ATP6V0E1O15342 81 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 SSX5O60225 188 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 PSMB8P28062 276 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 PPIFP30405 207 aaKnown RBP13.47□□□□□ -0.25
HERC3-214ENST00000601319 GNG2P59768 71 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 TAGLNQ01995 201 aaKnown RBP13.47□□□□□ -0.25
HERC3-214ENST00000601319 ZNF695Q8IW36 515 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
HERC3-214ENST00000601319 KLHL30-AS1Q8NEE0 82 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 TSNAXQ99598 290 aaKnown RBP13.47□□□□□ -0.25
HERC3-214ENST00000601319 SDHAF2Q9NX18 166 aa13.47□□□□□ -0.25
HERC3-214ENST00000601319 IGKV1-16P04430 117 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 RPLP1P05386 114 aaKnown RBP13.46□□□□□ -0.25
HERC3-214ENST00000601319 CDX1P47902 265 aaPredicted RBP13.46□□□□□ -0.25
HERC3-214ENST00000601319 THBS3P49746 956 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 ZNF660Q6AZW8 331 aaPredicted RBP13.46□□□□□ -0.25
HERC3-214ENST00000601319 C5orf30Q96GV9 206 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 RCC1LQ96I51 464 aaKnown RBP13.46□□□□□ -0.25
HERC3-214ENST00000601319 FBXL15Q9H469 300 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 PARP11Q9NR21 331 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 ANXA10Q9UJ72 324 aa13.46□□□□□ -0.25
HERC3-214ENST00000601319 TRAV41A0A0B4J266 112 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms