RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 IFNA1P01562 189 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 CD55P08174 381 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 SOX8P57073 446 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 BTNL3Q6UXE8 466 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 ACP7Q6ZNF0 438 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 RPP25LQ8N5L8 163 aaKnown RBP12.12□□□□□ -0.47
SMG9-211ENST00000601170 SDF2L1Q9HCN8 221 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 M0R296 226 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 PLA2G5P39877 138 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 BRWD1-AS2P59051 145 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 LHX4Q969G2 390 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 OR51M1Q9H341 326 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 MIOXQ9UGB7 285 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
SMG9-211ENST00000601170 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 ZNF737O75373 536 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 TRGC2P03986 189 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HOXC12P31275 282 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
SMG9-211ENST00000601170 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 TPRX1Q8N7U7 411 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 TOLLIPQ9H0E2 274 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 CXXC4Q9H2H0 198 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
SMG9-211ENST00000601170 UFSP2Q9NUQ7 469 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 FZR1Q9UM11 496 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 CLDN34H7C241 214 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 ZG16O60844 167 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 WISP2O76076 250 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 SSTR5P35346 364 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
SMG9-211ENST00000601170 WDR82Q6UXN9 313 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
SMG9-211ENST00000601170 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
SMG9-211ENST00000601170 TIMM8AO60220 97 aaPredicted RBP12.1□□□□□ -0.47
SMG9-211ENST00000601170 IGHG3P01860 377 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 RND2P52198 227 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 WDR25Q64LD2 544 aaPredicted RBP12.1□□□□□ -0.47
SMG9-211ENST00000601170 VWA1Q6PCB0 445 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 CENPVQ7Z7K6 275 aaPredicted RBP12.1□□□□□ -0.47
SMG9-211ENST00000601170 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 DTD1Q8TEA8 209 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 FAM210BQ96KR6 192 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 OR5H1A6NKK0 313 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 PMS2P5A8MQ11 134 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 CD81P60033 236 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 RPS16P62249 146 aaKnown RBP12.1□□□□□ -0.47
SMG9-211ENST00000601170 OR13D1Q8NGV5 346 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 SSX3Q99909 188 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 MSL2Q9HCI7 577 aa12.1□□□□□ -0.47
SMG9-211ENST00000601170 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
SMG9-211ENST00000601170 CLDN14O95500 239 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 COX5AP20674 150 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 KIR2DL2P43627 348 aaPredicted RBP12.09□□□□□ -0.47
SMG9-211ENST00000601170 FABP6P51161 128 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 LINC00205P59089 165 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 MEF2BQ02080 365 aaPredicted RBP12.09□□□□□ -0.47
SMG9-211ENST00000601170 COL10A1Q03692 680 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 OR13A1Q8NGR1 328 aa12.09□□□□□ -0.47
SMG9-211ENST00000601170 LINC00473A8K010 186 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 RAB29O14966 203 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 RBMXL2O75526 392 aaKnown RBP12.08□□□□□ -0.47
SMG9-211ENST00000601170 CECR9P0C854 216 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 FGF7P21781 194 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 S100PP25815 95 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 TLE1Q04724 770 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 PMS2P11Q13670 270 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 H2BFWTQ7Z2G1 175 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 C9orf106Q8NAJ2 232 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 RFESDQ8TAC1 157 aa12.08□□□□□ -0.47
SMG9-211ENST00000601170 DOCK11Q5JSL3 2073 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms