RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 UFD1Q92890 307 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 TMEM203Q969S6 136 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 PTX4Q96A99 478 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-204ENST00000601038 ISYNA1Q9NPH2 558 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 A3GALT2U3KPV4 340 aa13.14□□□□□ -0.31
SCAF1-204ENST00000601038 KMT2CQ8NEZ4 4911 aaKnown RBP13.14□□□□□ -0.31
SCAF1-204ENST00000601038 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 SLC17A2O00624 439 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 PROP1O75360 226 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 SLURP1P55000 103 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 TMEM50BP56557 158 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 HLA-DRB3P79483 266 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 P2RY14Q15391 338 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 ACTBL2Q562R1 376 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 ZNF562Q6V9R5 426 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 TMEM91Q6ZNR0 172 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 PPP1R27Q86WC6 154 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 ABHD5Q8WTS1 349 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 GFI1Q99684 422 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 PLGRKTQ9HBL7 147 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 Q9N2K0 584 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
SCAF1-204ENST00000601038 FOXI3A8MTJ6 420 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-204ENST00000601038 SAP30O75446 220 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 SCTP09683 121 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 TPBGQ13641 420 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 PSG5Q15238 335 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 UNQ5815/PRO19632Q6UWF5 114 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-204ENST00000601038 CLCC1Q96S66 551 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 C12orf4Q9NQ89 552 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 METTL1Q9UBP6 276 aaKnown RBP13.12□□□□□ -0.31
SCAF1-204ENST00000601038 ZNF221Q9UK13 617 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 GAB2Q9UQC2 676 aa13.12□□□□□ -0.31
SCAF1-204ENST00000601038 IGHV4OR15-8A0A075B7B6 117 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 A0A087WW49 117 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 ARL6IP5O75915 188 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 HSPB1P04792 205 aaKnown RBP13.11□□□□□ -0.31
SCAF1-204ENST00000601038 CPEP16870 476 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 CD40LGP29965 261 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 TRAM1Q15629 374 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 RAB11BQ15907 218 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 ACSM6Q6P461 480 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 LFNGQ8NES3 379 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 FLYWCH2Q96CP2 140 aaKnown RBP13.11□□□□□ -0.31
SCAF1-204ENST00000601038 ARHGAP5-AS1Q96IT6 56 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
SCAF1-204ENST00000601038 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
SCAF1-204ENST00000601038 SLA2Q9H6Q3 261 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 TPRKBQ9Y3C4 175 aa13.11□□□□□ -0.31
SCAF1-204ENST00000601038 AK6Q9Y3D8 172 aaKnown RBP13.11□□□□□ -0.31
SCAF1-204ENST00000601038 C3orf84H3BNL1 204 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 ARPC1BO15143 372 aaKnown RBP13.1□□□□□ -0.31
SCAF1-204ENST00000601038 SPDEFO95238 335 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 IGKV1-16P04430 117 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 TFAP2AP05549 437 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 OR8U9P0C7N5 309 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 SPNP16150 400 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 PSMA1P25786 263 aaKnown RBP13.1□□□□□ -0.31
SCAF1-204ENST00000601038 RANBP1P43487 201 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 VEGFCP49767 419 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 RPS16P62249 146 aaKnown RBP13.1□□□□□ -0.31
SCAF1-204ENST00000601038 PDPNQ86YL7 162 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 ZNF383Q8NA42 475 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 OR6Q1Q8NGQ2 317 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 RHOVQ96L33 236 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 MS4A10Q96PG2 267 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 CMSS1Q9BQ75 279 aaKnown RBP13.1□□□□□ -0.31
SCAF1-204ENST00000601038 PECRQ9BY49 303 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
SCAF1-204ENST00000601038 IGKV1-6A0A0C4DH72 117 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 CA2P00918 260 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 IGHV3-11P01762 117 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 GP9P14770 177 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 LINC00205P59089 165 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 TPPP2P59282 170 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 RPS25P62851 125 aaKnown RBP13.09□□□□□ -0.31
SCAF1-204ENST00000601038 C2orf76Q3KRA6 126 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 OR56B1Q8NGI3 324 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 ARPC1AQ92747 370 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 RDH8Q9NYR8 311 aa13.09□□□□□ -0.31
SCAF1-204ENST00000601038 APOA2P02652 100 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.32
SCAF1-204ENST00000601038 SERPINB10P48595 397 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 PSMD7P51665 324 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 CLDN12P56749 244 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 PITPNAQ00169 270 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
SCAF1-204ENST00000601038 FXYD3Q14802 87 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 PLAC9Q5JTB6 97 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.08□□□□□ -0.32
SCAF1-204ENST00000601038 OR4C12Q96R67 309 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 V9GY05 133 aa13.08□□□□□ -0.32
SCAF1-204ENST00000601038 M0R1X1 148 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms