RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 CDH26Q8IXH8 852 aa12.7□□□□□ -0.38
USE1-208ENST00000600970 APH1BQ8WW43 257 aa12.7□□□□□ -0.38
USE1-208ENST00000600970 SULT4A1Q9BR01 284 aa12.7□□□□□ -0.38
USE1-208ENST00000600970 PEF1Q9UBV8 284 aaKnown RBP12.7□□□□□ -0.38
USE1-208ENST00000600970 HERC2O95714 4834 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 TRBV5-7A0A0A0MS05 114 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 A0A1W2PPK0 400 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 RBMY1BA6NDE4 496 aaKnown RBP12.69□□□□□ -0.38
USE1-208ENST00000600970 RBMY1EA6NEQ0 496 aaKnown RBP12.69□□□□□ -0.38
USE1-208ENST00000600970 SLC25A17O43808 307 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 SPDEFO95238 335 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 BRI3O95415 125 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 RBMY1DP0C7P1 496 aaKnown RBP12.69□□□□□ -0.38
USE1-208ENST00000600970 CD81P60033 236 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 SSBP2P81877 361 aaPredicted RBP12.69□□□□□ -0.38
USE1-208ENST00000600970 DEFA5Q01523 94 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 ZNF343Q6P1L6 599 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 DRAXINQ8NBI3 349 aaPredicted RBP12.69□□□□□ -0.38
USE1-208ENST00000600970 PYDC1Q8WXC3 89 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 FAM46BQ96A09 425 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 TSNAXQ99598 290 aaKnown RBP12.69□□□□□ -0.38
USE1-208ENST00000600970 NEURL2Q9BR09 285 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 AGMATQ9BSE5 352 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 BABAM2Q9NXR7 383 aa12.69□□□□□ -0.38
USE1-208ENST00000600970 PROP1O75360 226 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 TPPPO94811 219 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 LY6G6CO95867 125 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 CPEP16870 476 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 AADACP22760 399 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 LINC00205P59089 165 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 RPS16P62249 146 aaKnown RBP12.68□□□□□ -0.38
USE1-208ENST00000600970 DYRK1AQ13627 763 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 CBR4Q8N4T8 237 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 DEFB125Q8N687 156 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 OR2K2Q8NGT1 345 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 PGLYRP3Q96LB9 341 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 FAAP24Q9BTP7 215 aa12.68□□□□□ -0.38
USE1-208ENST00000600970 LOC100130705A0A1B0GUX0 176 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 ITGB1BP1O14713 200 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 CD7P09564 240 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 CAPGP40121 348 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
USE1-208ENST00000600970 ZNF880Q6PDB4 577 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 C6orf201Q7Z4U5 140 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 ZFP41Q8N8Y5 198 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 BVESQ8NE79 360 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 NEDD4LQ96PU5 975 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
USE1-208ENST00000600970 WFDC10AQ9H1F0 79 aa12.67□□□□□ -0.38
USE1-208ENST00000600970 ZNF785A8K8V0 405 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 H3BNX3 289 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 OR2A4O95047 310 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 CNIH1O95406 144 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 DCKP27707 260 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 PDPNQ86YL7 162 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 LAX1Q8IWV1 398 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 ZNF383Q8NA42 475 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 C11orf54Q9H0W9 315 aaPredicted RBP12.66□□□□□ -0.38
USE1-208ENST00000600970 SRD5A3Q9H8P0 318 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 SLC2A8Q9NY64 477 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 PEMTQ9UBM1 199 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 CLEC2DQ9UHP7 191 aa12.66□□□□□ -0.38
USE1-208ENST00000600970 WBP4O75554 376 aaKnown RBP12.65□□□□□ -0.38
USE1-208ENST00000600970 NAPSAO96009 420 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 RASSF2P50749 326 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 PJVKQ0ZLH3 352 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
USE1-208ENST00000600970 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 USMG5Q96IX5 58 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 TMEM68Q96MH6 324 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 UQCC2Q9BRT2 126 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 CHMP1AQ9HD42 196 aaPredicted RBP12.65□□□□□ -0.38
USE1-208ENST00000600970 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 OR1A1Q9P1Q5 309 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 GHRLQ9UBU3 117 aa12.65□□□□□ -0.38
USE1-208ENST00000600970 OR11H12B2RN74 326 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 RBMXL2O75526 392 aaKnown RBP12.64□□□□□ -0.39
USE1-208ENST00000600970 IGLV2-23P01705 113 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 CEACAM6P40199 344 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 NKAIN3Q8N8D7 197 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 EDARADDQ8WWZ3 215 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 SNAPC3Q92966 411 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 SLC29A1Q99808 456 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 COA4Q9NYJ1 87 aa12.64□□□□□ -0.39
USE1-208ENST00000600970 EXOSC1Q9Y3B2 195 aaKnown RBP12.64□□□□□ -0.39
USE1-208ENST00000600970 KMT2AQ03164 3969 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 DYNC1I1O14576 645 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 AIREO43918 545 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 CIB2O75838 187 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 APOA2P02652 100 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 CRYGBP07316 175 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 HTR2CP28335 458 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 LGALS7P47929 136 aa12.63□□□□□ -0.39
USE1-208ENST00000600970 MOB1BQ7L9L4 216 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms