RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 P0C879 139 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 MMP9P14780 707 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
VRK3-217ENST00000599538 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 RBPJQ06330 500 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 C17orf58Q2M2W7 97 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 NCR3LG1Q68D85 454 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 UQCC3Q6UW78 93 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 PPP1R35Q8TAP8 253 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 SUN5Q8TC36 379 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 VKORC1Q9BQB6 163 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 ABHD14AQ9BUJ0 271 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 KCNJ16Q9NPI9 418 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 PARP11Q9NR21 331 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 FAM212BQ9NTI7 297 aaPredicted RBP11.99□□□□□ -0.49
VRK3-217ENST00000599538 COL6A6A6NMZ7 2263 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 YLPM1P49750 1951 aaKnown RBP11.99□□□□□ -0.49
VRK3-217ENST00000599538 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 TXNL1O43396 289 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 RUNX1Q01196 453 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 DEFA5Q01523 94 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 ARL16Q0P5N6 197 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 TRAT1Q6PIZ9 186 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 TMEM182Q6ZP80 229 aaPredicted RBP11.99□□□□□ -0.49
VRK3-217ENST00000599538 DMRTC2Q8IXT2 367 aaPredicted RBP11.99□□□□□ -0.49
VRK3-217ENST00000599538 SDSLQ96GA7 329 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 CALYQ9NYX4 217 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 CACFD1Q9UGQ2 172 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 MMP24Q9Y5R2 645 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 A0A1W2PPE3 182 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 C9JQL5 133 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 TNFSF4P23510 183 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 GRNP28799 593 aaKnown RBP11.98□□□□□ -0.49
VRK3-217ENST00000599538 BLOC1S1P78537 153 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 IL34Q6ZMJ4 242 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 ZNF561Q8N587 486 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 KDF1Q8NAX2 398 aaPredicted RBP11.98□□□□□ -0.49
VRK3-217ENST00000599538 LYPD6BQ8NI32 183 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 Q8TCH9 128 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 C14orf79Q96F83 325 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 LRRC46Q96FV0 321 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 ARFGEF3Q5TH69 2177 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 F2RL2O00254 374 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 NUPL2O15504 423 aaKnown RBP11.98□□□□□ -0.49
VRK3-217ENST00000599538 CLDN14O95500 239 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
VRK3-217ENST00000599538 METTL15P1P0C7V9 234 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 ERVFRD-1P60508 538 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 ZNF616Q08AN1 781 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 CATR1Q13166 79 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 SWI5Q1ZZU3 235 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 ZNF788Q6ZQV5 615 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 HAPLN4Q86UW8 402 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 RAB40CQ96S21 281 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 TREM1Q9NP99 234 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 JPT1Q9UK76 154 aa11.98□□□□□ -0.49
VRK3-217ENST00000599538 HCFC1P51610 2035 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 YPEL1O60688 119 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 FCN3O75636 299 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 MMP23AO75900 390 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 DUTP33316 252 aaKnown RBP11.97□□□□□ -0.49
VRK3-217ENST00000599538 GPR12P47775 334 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 F2RL1P55085 397 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 TLE1Q04724 770 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 BAXQ07812 192 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 ZNF266Q14584 549 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 CDSNQ15517 529 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 MIDNQ504T8 468 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 YPEL2Q96QA6 119 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 IFI27L2Q9H2X8 130 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 PSENENQ9NZ42 101 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 WSB1Q9Y6I7 421 aa11.97□□□□□ -0.49
VRK3-217ENST00000599538 A0A1B0GV50 99 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 E7EQL1 145 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 UCNP55089 124 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 RPL23AP62750 156 aaKnown RBP11.96□□□□□ -0.49
VRK3-217ENST00000599538 OR2G3Q8NGZ4 309 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 UQCC1Q9NVA1 299 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 OR6C3Q9NZP0 311 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 LRBAP50851 2863 aa11.96□□□□□ -0.49
VRK3-217ENST00000599538 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 FAM90A27PA6NNH2 459 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 TOR1AO14656 332 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 PLAUP00749 431 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 PRH1P02810 166 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 CAMLGP49069 296 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 SULT1A1P50225 295 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 UBE2KP61086 200 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 SPANXN5Q5MJ07 72 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 TEX36Q5VZQ5 186 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 ZNF66Q6ZN08 573 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 LINC01560Q8TB33 94 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 EDARADDQ8WWZ3 215 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 HSD17B10Q99714 261 aaKnown RBP11.96□□□□□ -0.5
VRK3-217ENST00000599538 RBKSQ9H477 322 aa11.96□□□□□ -0.5
VRK3-217ENST00000599538 ZNF665Q9H7R5 613 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms