RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 METTL1Q9UBP6 276 aaKnown RBP8.11□□□□□ -1.11
LSM4-205ENST00000597776 AK3Q9UIJ7 227 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 RNF150Q9ULK6 438 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 SORL1Q92673 2214 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 TENM2Q9NT68 2774 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 HSPA12AO43301 675 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 PROP1O75360 226 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 BPNT1O95861 308 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 CA2P00918 260 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 IGKV1-16P04430 117 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 CDK1P06493 297 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 SCTP09683 121 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 OR8U9P0C7N5 309 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 SRMP19623 302 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 MC5RP33032 325 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 CEACAM6P40199 344 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 HLA-DRB3P79483 266 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 PITPNAQ00169 270 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 TMEM267Q0VDI3 215 aaPredicted RBP8.1□□□□□ -1.11
LSM4-205ENST00000597776 PSG5Q15238 335 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 SRSF7Q16629 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
LSM4-205ENST00000597776 HSD17B12Q53GQ0 312 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 CD200R1LQ6Q8B3 271 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 MOB1BQ7L9L4 216 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 MS4A15Q8N5U1 240 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 OR6Q1Q8NGQ2 317 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 GRPEL2Q8TAA5 225 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 TMEM203Q969S6 136 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 GFI1Q99684 422 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 MND1Q9BWT6 205 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 LPAR5Q9H1C0 372 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
LSM4-205ENST00000597776 GAR1Q9NY12 217 aaKnown RBP8.1□□□□□ -1.11
LSM4-205ENST00000597776 LSM2Q9Y333 95 aaKnown RBP8.1□□□□□ -1.11
LSM4-205ENST00000597776 TRBV6-6A0A0A6YYG2 114 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 IGKV1-6A0A0C4DH72 117 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 PTGES3LE9PB15 166 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 RBBP9O75884 186 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 TRGV3P03979 118 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 HSPB1P04792 205 aaKnown RBP8.09□□□□□ -1.11
LSM4-205ENST00000597776 UCHL1P09936 223 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 CPEP16870 476 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 ZBTB25P24278 435 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 SPHARQ15513 63 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 AKIRIN2Q53H80 203 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 OGFRL1Q5TC84 451 aaPredicted RBP8.09□□□□□ -1.11
LSM4-205ENST00000597776 PYHIN1Q6K0P9 492 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 ZNF562Q6V9R5 426 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 ZNF383Q8NA42 475 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 OR6M1Q8NGM8 313 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 EDARADDQ8WWZ3 215 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 RHOVQ96L33 236 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 OR4C12Q96R67 309 aa8.09□□□□□ -1.11
LSM4-205ENST00000597776 FOXI3A8MTJ6 420 aaPredicted RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 ITGB1BP1O14713 200 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 ARPC1BO15143 372 aaKnown RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 SLC25A17O43808 307 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 TFAP2AP05549 437 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 CD37P11049 281 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 CLDN12P56749 244 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 RPS16P62249 146 aaKnown RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 SSBP2P81877 361 aaPredicted RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 DEFA5Q01523 94 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 FXYD3Q14802 87 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 MED22Q15528 200 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 LIPKQ5VXJ0 399 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 FAM89BQ8N5H3 189 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 FLYWCH2Q96CP2 140 aaKnown RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 ARHGAP5-AS1Q96IT6 56 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 TSNAXQ99598 290 aaKnown RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 URM1Q9BTM9 101 aaKnown RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 RSRP1Q9BUV0 290 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 RIMS4Q9H426 269 aaPredicted RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 PLGRKTQ9HBL7 147 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 Q9N2K0 584 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 C12orf4Q9NQ89 552 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 ZNF221Q9UK13 617 aa8.08□□□□□ -1.12
LSM4-205ENST00000597776 AK6Q9Y3D8 172 aaKnown RBP8.08□□□□□ -1.12
LSM4-205ENST00000597776 ANKRD34BA5PLL1 514 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 M0R1X1 148 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 SLC17A2O00624 439 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 SPDEFO95238 335 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 APOA2P02652 100 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 CD3GP09693 182 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 LYL1P12980 280 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 ARSBP15848 533 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 CD40LGP29965 261 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 VEGFCP49767 419 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 TMEM50BP56557 158 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 RPS25P62851 125 aaKnown RBP8.07□□□□□ -1.12
LSM4-205ENST00000597776 PJVKQ0ZLH3 352 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 RAB11BQ15907 218 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 RNLSQ5VYX0 342 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 TMEM91Q6ZNR0 172 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 Q8N1Y9 231 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 POC5Q8NA72 575 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 OR5T1Q8NG75 326 aa8.07□□□□□ -1.12
LSM4-205ENST00000597776 PTX4Q96A99 478 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms