RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 STEAP3Q658P3 488 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 TMEM65Q6PI78 240 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 IZUMO1Q8IYV9 350 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 OR56B1Q8NGI3 324 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 CT45A3Q8NHU0 189 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 S1PR3Q99500 378 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 OR51J1Q9H342 316 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 IGHV4OR15-8A0A075B7B6 117 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 A0A087WW49 117 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 LINC01619G3V211 115 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 G3V318 75 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 SOCS1O15524 211 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 IGF1P05019 195 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 PPP1CCP36873 323 aaKnown RBP11.87□□□□□ -0.51
LIG1-214ENST00000597146 HTD2P86397 168 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 PITPNAQ00169 270 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 UNC119Q13432 240 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 SLC25A48Q6ZT89 311 aaKnown RBP11.87□□□□□ -0.51
LIG1-214ENST00000597146 GAPTQ8N292 157 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 OR2AK2Q8NG84 335 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 RTN4IP1Q8WWV3 396 aaPredicted RBP11.87□□□□□ -0.51
LIG1-214ENST00000597146 FCGR1BQ92637 280 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 RASL11BQ9BPW5 248 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 MBNL3Q9NUK0 354 aaKnown RBP11.87□□□□□ -0.51
LIG1-214ENST00000597146 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
LIG1-214ENST00000597146 TRAV1-2A0A0B4J238 106 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 SLC31A2O15432 143 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 MOSP00540 346 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 CD37P11049 281 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 RAB3BP20337 219 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 CD1BP29016 333 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 PPIFP30405 207 aaKnown RBP11.86□□□□□ -0.51
LIG1-214ENST00000597146 SOX6P35712 828 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 C22orf42Q6IC83 251 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 SPARTQ8N0X7 666 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 CMSS1Q9BQ75 279 aaKnown RBP11.86□□□□□ -0.51
LIG1-214ENST00000597146 LPAR5Q9H1C0 372 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 AK3Q9UIJ7 227 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 MGAT4AQ9UM21 535 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
LIG1-214ENST00000597146 METTL21EPA6NDL7 271 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 ZNF736B4DX44 427 aaPredicted RBP11.85□□□□□ -0.51
LIG1-214ENST00000597146 YPEL1O60688 119 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 CD3GP09693 182 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 OR5H8P0DN80 308 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 SLC2A2P11168 524 aaPredicted RBP11.85□□□□□ -0.51
LIG1-214ENST00000597146 GADD45AP24522 165 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 ZNF134P52741 427 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 F2RL1P55085 397 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 QRFPP83859 136 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 SSX1Q16384 188 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 YPEL2Q96QA6 119 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 ABHD14AQ9BUJ0 271 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 NDUFB11Q9NX14 153 aa11.85□□□□□ -0.51
LIG1-214ENST00000597146 A0A075B6Q4 140 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 LANCL1O43813 399 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 DEDDO75618 318 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 BRI3O95415 125 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 IGLV1-51P01701 117 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 IGLV1-40P01703 118 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 TALDO1P37837 337 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 CEACAM6P40199 344 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 RAB9AP51151 201 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 GNMTQ14749 295 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 C5orf24Q7Z6I8 188 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 FAM89BQ8N5H3 189 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 ZNF439Q8NDP4 499 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 CASTOR1Q8WTX7 329 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 RAB3CQ96E17 227 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 ARHGAP5-AS1Q96IT6 56 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 GFI1Q99684 422 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 PECRQ9BY49 303 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 TOLLIPQ9H0E2 274 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 TUBA4BQ9H853 241 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 TPSG1Q9NRR2 321 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 ZNF107Q9UII5 783 aaPredicted RBP11.84□□□□□ -0.51
LIG1-214ENST00000597146 ZNF580Q9UK33 172 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 HSF4Q9ULV5 492 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
LIG1-214ENST00000597146 MUC4Q99102 2169 aa11.84□□□□□ -0.51
LIG1-214ENST00000597146 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 TMEM272A0A1B0GTI8 110 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 IFITM5A6NNB3 132 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 ATP6V0E1O15342 81 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 GALP22466 123 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 ZBTB25P24278 435 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 OR10A3P58181 314 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 ARFRP1Q13795 201 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 HMGN3Q15651 99 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms