RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 HIF1ANQ9NWT6 349 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 GAB2Q9UQC2 676 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 SFT2D2O95562 160 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 IGLV1-47P01700 117 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 IGHV4-31P0DP07 118 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 GATA3P23771 443 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 IL3RAP26951 378 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 GZMKP49863 264 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 SLC9A3R2Q15599 337 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 HCP5Q6MZN7 132 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 OR11H6Q8NGC7 330 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 OR51H1Q8NH63 302 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 MSI2Q96DH6 328 aaKnown RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 OR51J1Q9H342 316 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 KCNIP3Q9Y2W7 256 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 RNF212BA8MTL3 300 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 M0R1X1 148 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 OR5AC1P0C628 307 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 ANXA3P12429 323 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 CATR1Q13166 79 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 EIF4EBP1Q13541 118 aaPredicted RBP11.93□□□□□ -0.5
VRK3-212ENST00000596814 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 CASTOR1Q8WTX7 329 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 GALNT14Q96FL9 552 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 S1PR3Q99500 378 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
VRK3-212ENST00000596814 ZNF251Q9BRH9 671 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 LIN7CQ9NUP9 197 aaKnown RBP11.93□□□□□ -0.5
VRK3-212ENST00000596814 ITGB1BP2Q9UKP3 347 aa11.93□□□□□ -0.5
VRK3-212ENST00000596814 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 ODF3BA8MYP8 253 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 SSNA1O43805 119 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 DUS4LO95620 317 aaKnown RBP11.92□□□□□ -0.5
VRK3-212ENST00000596814 IFNA2P01563 188 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 ARG1P05089 322 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 F2RP25116 425 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 ZNF137PP52743 207 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 FAM71F2Q6NXP2 309 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 PDZD9Q8IXQ8 264 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 CADM3Q8N126 398 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 OR4P4Q8NGL7 312 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 LHX4Q969G2 390 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 AUP1Q9Y679 476 aa11.92□□□□□ -0.5
VRK3-212ENST00000596814 H0Y980 276 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 PROP1O75360 226 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 TGFAP01135 160 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 DUTP33316 252 aaKnown RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 C1orf229Q6ZS94 237 aaPredicted RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 MITD1Q8WV92 249 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 TCTEX1D2Q8WW35 142 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 TP53RKQ96S44 253 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 PHB2Q99623 299 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 BAHCC1Q9P281 2608 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 BUB1B-PAK6H3BSN5 160 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 B3GALNT1O75752 331 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 BCAP31P51572 246 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 RPL30P62888 115 aaKnown RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 SP6Q3SY56 376 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 C12orf45Q8N5I9 185 aaPredicted RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 DRAXINQ8NBI3 349 aaPredicted RBP11.91□□□□□ -0.5
VRK3-212ENST00000596814 COQ8AQ8NI60 647 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 ST6GALNAC6Q969X2 333 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 PRR13Q9NZ81 148 aa11.91□□□□□ -0.5
VRK3-212ENST00000596814 LINC00473A8K010 186 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 J3QLI3 93 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 HTR1DP28221 377 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 THBS3P49746 956 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 UBE2E1P51965 193 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 RRAS2P62070 204 aaPredicted RBP11.9□□□□□ -0.5
VRK3-212ENST00000596814 TMEM187Q14656 261 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 ANKRD55Q3KP44 614 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 MED28Q9H204 178 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 NOTCH2Q04721 2471 aa11.9□□□□□ -0.5
VRK3-212ENST00000596814 A0A1W2PRD5 423 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 A0A1W2PRF3 423 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 A0A1W2PRM7 423 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
VRK3-212ENST00000596814 UCP1P25874 307 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 REG1BP48304 166 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 LINC00205P59089 165 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 SRPXP78539 464 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 OR2B11Q5JQS5 317 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 LIAT1Q6ZQX7 453 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 TGIF2LXQ8IUE1 241 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 UXS1Q8NBZ7 420 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 GLYATL2Q8WU03 294 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 RPEQ96AT9 228 aa11.89□□□□□ -0.51
VRK3-212ENST00000596814 MRPL20Q9BYC9 149 aaKnown RBP11.89□□□□□ -0.51
VRK3-212ENST00000596814 TMEM222Q9H0R3 208 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms