RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 PDCD5O14737 125 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 HSPA12AO43301 675 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 SOX15O60248 233 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 MRPS14O60783 128 aaKnown RBP10.17□□□□□ -0.78
LIG1-212ENST00000596549 IGLV1-40P01703 118 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 OR5H8P0DN80 308 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 RAB3BP20337 219 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 GALP22466 123 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 CRIP2P52943 208 aaPredicted RBP10.17□□□□□ -0.78
LIG1-212ENST00000596549 KIAA0141Q14154 515 aaPredicted RBP10.17□□□□□ -0.78
LIG1-212ENST00000596549 ASPHD1Q5U4P2 390 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 DRAXINQ8NBI3 349 aaPredicted RBP10.17□□□□□ -0.78
LIG1-212ENST00000596549 OR8U1Q8NH10 309 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 RAB3CQ96E17 227 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 TOLLIPQ9H0E2 274 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 GNB4Q9HAV0 340 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 RDH8Q9NYR8 311 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 KIAA1456Q9P272 454 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 RAB22AQ9UL26 194 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 WASHC3Q9Y3C0 194 aa10.17□□□□□ -0.78
LIG1-212ENST00000596549 TRAV41A0A0B4J266 112 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 TRDCB7Z8K6 153 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 IGKV1-16P04430 117 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 HIST1H1DP16402 221 aaKnown RBP10.16□□□□□ -0.78
LIG1-212ENST00000596549 GNB3P16520 340 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 RAB6AP20340 208 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 PSMD7P51665 324 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
LIG1-212ENST00000596549 RAB25P57735 213 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 KIR2DS1Q14954 304 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 ECSCRQ19T08 205 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 IGSF11Q5DX21 431 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 LIN54Q6MZP7 749 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 ZNF383Q8NA42 475 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 OR4A4PQ8NGN8 299 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 OR10R2Q8NGX6 335 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 MAFIPQ8WZ33 124 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 ELF5Q9UKW6 265 aaPredicted RBP10.16□□□□□ -0.78
LIG1-212ENST00000596549 RNF150Q9ULK6 438 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 GAB2Q9UQC2 676 aa10.16□□□□□ -0.78
LIG1-212ENST00000596549 H7C2Y5 167 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 FCN1O00602 326 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 FABP7O15540 132 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 EGR2P11161 476 aaPredicted RBP10.15□□□□□ -0.78
LIG1-212ENST00000596549 PSMB9P28065 219 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 GNB1P62873 340 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 CX3CL1P78423 397 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 MINDY2Q8NBR6 621 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 DPF1Q92782 380 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 MCRIP2Q9BUT9 160 aaKnown RBP10.15□□□□□ -0.78
LIG1-212ENST00000596549 GPR61Q9BZJ8 451 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 GHITMQ9H3K2 345 aa10.15□□□□□ -0.78
LIG1-212ENST00000596549 TXNL4BQ9NX01 149 aaKnown RBP10.15□□□□□ -0.78
LIG1-212ENST00000596549 ZNF230Q9UIE0 474 aaPredicted RBP10.15□□□□□ -0.78
LIG1-212ENST00000596549 COL7A1Q02388 2944 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 A0A075B6Q4 140 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 IGKV1D-8A0A087WSZ0 117 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 TRBV6-7A0A0A0MS04 114 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 A0A1W2PN81 502 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 I3L521 148 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 RBBP9O75884 186 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 TFAP2AP05549 437 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 GSTT2P0CG29 244 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 GSTT2BP0CG30 244 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 FGF9P31371 208 aaPredicted RBP10.14□□□□□ -0.79
LIG1-212ENST00000596549 MC5RP33032 325 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 CHRNA7P36544 502 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 SSBP2P81877 361 aaPredicted RBP10.14□□□□□ -0.79
LIG1-212ENST00000596549 PSG5Q15238 335 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 PDPNQ86YL7 162 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 FCGR1BQ92637 280 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 UBE2E2Q96LR5 201 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 OR5B12Q96R08 314 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 CHCHD6Q9BRQ6 235 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
LIG1-212ENST00000596549 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 METTL1Q9UBP6 276 aaKnown RBP10.14□□□□□ -0.79
LIG1-212ENST00000596549 STUB1Q9UNE7 303 aa10.14□□□□□ -0.79
LIG1-212ENST00000596549 M0R1X1 148 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 BET1O15155 118 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 SPDEFO95238 335 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 CA2P00918 260 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 GSTP1P09211 210 aaKnown RBP10.13□□□□□ -0.79
LIG1-212ENST00000596549 GADD45AP24522 165 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 RANBP1P43487 201 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 SERPINB10P48595 397 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 RUNX1Q01196 453 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 PLGLAQ15195 96 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 ZNF660Q6AZW8 331 aaPredicted RBP10.13□□□□□ -0.79
LIG1-212ENST00000596549 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.13□□□□□ -0.79
LIG1-212ENST00000596549 OR5M8Q8NGP6 311 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 ALX4Q9H161 411 aaPredicted RBP10.13□□□□□ -0.79
LIG1-212ENST00000596549 OR51E2Q9H255 320 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 RNF167Q9H6Y7 350 aa10.13□□□□□ -0.79
LIG1-212ENST00000596549 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.13□□□□□ -0.79
LIG1-212ENST00000596549 SDHAF2Q9NX18 166 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms