RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TNFRSF19Q9NS68 423 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 NECAP2Q9NVZ3 263 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 RABL2AQ9UBK7 228 aaPredicted RBP8.45□□□□□ -1.06
LIG1-210ENST00000596332 RABL2BQ9UNT1 228 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 TCF19Q9Y242 345 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 AMMECR1Q9Y4X0 333 aaPredicted RBP8.45□□□□□ -1.06
LIG1-210ENST00000596332 ANKRD20A5PA0PJZ0 165 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 FAM181BA6NEQ2 426 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 OR5H14A6NHG9 310 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 LINC00473A8K010 186 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 J3QRK9 145 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 RAB29O14966 203 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 GPR137BO60478 399 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 PPYP01298 95 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 IFNA2P01563 188 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 SNRNP70P08621 437 aaKnown RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 CD1BP29016 333 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 GNRHRP30968 328 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 RPL30P62888 115 aaKnown RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 SSBP1Q04837 148 aaKnown RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 SCGB2A2Q13296 93 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 KLF9Q13886 244 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 LY6EQ16553 131 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 FAM71F2Q6NXP2 309 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 GLDNQ6ZMI3 551 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 LINC00299Q6ZSB3 139 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 DRAXINQ8NBI3 349 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 OR56B4Q8NH76 319 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 FAM216AQ8WUB2 273 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 TOMM40LQ969M1 308 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 RPEQ96AT9 228 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 EAF1Q96JC9 268 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 GPHA2Q96T91 129 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 THAP7Q9BT49 309 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 FXYD6Q9H0Q3 95 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 OR2D2Q9H210 308 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 GHITMQ9H3K2 345 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 IFT46Q9NQC8 304 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 CCL28Q9NRJ3 127 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 PIPOXQ9P0Z9 390 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 ZNF107Q9UII5 783 aaPredicted RBP8.44□□□□□ -1.06
LIG1-210ENST00000596332 VPREB3Q9UKI3 123 aa8.44□□□□□ -1.06
LIG1-210ENST00000596332 COL6A5A8TX70 2615 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 H0YJW9 148 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 DUTP33316 252 aaKnown RBP8.43□□□□□ -1.06
LIG1-210ENST00000596332 S100A5P33763 92 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 ARPC4P59998 168 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 FAAP20Q6NZ36 180 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 TMEM219Q86XT9 240 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 TGIF2LXQ8IUE1 241 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.43□□□□□ -1.06
LIG1-210ENST00000596332 OR5R1Q8NH85 324 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 GINS4Q9BRT9 223 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 DPAGT1Q9H3H5 408 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 C1RLQ9NZP8 487 aa8.43□□□□□ -1.06
LIG1-210ENST00000596332 IGKV1D-33P01593 117 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 IGKV1-33P01594 117 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 CNTFRP26992 372 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 LUMP51884 338 aaPredicted RBP8.42□□□□□ -1.06
LIG1-210ENST00000596332 F2RL1P55085 397 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 TAS2R46P59540 309 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 ACTBP60709 375 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 BLCAPP62952 87 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 ACTG1P63261 375 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 CCDC144NLQ6NUI1 221 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 STEAP1BQ6NZ63 245 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
LIG1-210ENST00000596332 ZNF818PQ6ZRF7 136 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 MOB3BQ86TA1 216 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 Q8N402 240 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 ZNF645Q8N7E2 425 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 OR4C16Q8NGL9 310 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 OR5H2Q8NGV7 314 aa8.42□□□□□ -1.06
LIG1-210ENST00000596332 RBM14Q96PK6 669 aaKnown RBP8.42□□□□□ -1.06
LIG1-210ENST00000596332 ZNF2Q9BSG1 426 aaPredicted RBP8.42□□□□□ -1.06
LIG1-210ENST00000596332 SRRM4A7MD48 611 aaKnown RBP8.41□□□□□ -1.06
LIG1-210ENST00000596332 TRIM77I1YAP6 450 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 TXNL1O43396 289 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 TSPAN9O75954 239 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 RAB3DO95716 219 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 IGLV2-23P01705 113 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 IGKV1-16P04430 117 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 TBPP20226 339 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 IL3RAP26951 378 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 BRS3P32247 399 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 GPR12P47775 334 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 UCP3P55916 312 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 IFITM3Q01628 133 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 ZNF45Q02386 682 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 MSMO1Q15800 293 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 PYDC2Q56P42 97 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 Q6ZSV7 163 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 Q8N2B8 174 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 BVESQ8NE79 360 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 OR13C8Q8NGS7 320 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms