RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CAPGP40121 348 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 SYNJ2BPP57105 145 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 MOGAT2Q3SYC2 334 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 ZFP1Q6P2D0 407 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 C6orf201Q7Z4U5 140 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 GRPEL2Q8TAA5 225 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 UQCC2Q9BRT2 126 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 FAAP24Q9BTP7 215 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 C9orf16Q9BUW7 83 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 HIPK2Q9H2X6 1198 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 SIGLEC8Q9NYZ4 499 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 ABRACLQ9P1F3 81 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 GHRLQ9UBU3 117 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 ADAM30Q9UKF2 790 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 C13orf42A0A1B0GVH6 325 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 ANKRD34BA5PLL1 514 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 IZUMO1RA6ND01 250 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 BRI3O95415 125 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 MYL12AP19105 171 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 MECP2P51608 486 aaKnown RBP7.57□□□□□ -1.2
LIG1-209ENST00000596104 LINC00205P59089 165 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 FXYD3Q14802 87 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 OR10K2Q6IF99 312 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 NKAIN3Q8N8D7 197 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 ZNF383Q8NA42 475 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 DRAXINQ8NBI3 349 aaPredicted RBP7.57□□□□□ -1.2
LIG1-209ENST00000596104 OR5T1Q8NG75 326 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 NEDD4LQ96PU5 975 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 TSNAXQ99598 290 aaKnown RBP7.57□□□□□ -1.2
LIG1-209ENST00000596104 TMED9Q9BVK6 235 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 C11orf54Q9H0W9 315 aaPredicted RBP7.57□□□□□ -1.2
LIG1-209ENST00000596104 TUBA4BQ9H853 241 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 OR1A1Q9P1Q5 309 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
LIG1-209ENST00000596104 A0A0G2JLM5 398 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 PNMA8CA0A1B0GUJ8 204 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 IRGMA1A4Y4 181 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 SLC25A17O43808 307 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 TRBV12-3P01733 135 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 CPEP16870 476 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 HTR2CP28335 458 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 RPS27AP62979 156 aaKnown RBP7.56□□□□□ -1.2
LIG1-209ENST00000596104 DEFA5Q01523 94 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 ZNF343Q6P1L6 599 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 MOB1BQ7L9L4 216 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 Q8N402 240 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 IL17DQ8TAD2 202 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 PTX4Q96A99 478 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 FAM110AQ9BQ89 295 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 TM2D1Q9BX74 207 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 ZNF355PQ9NSJ1 428 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 FAM53CQ9NYF3 392 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 CEPT1Q9Y6K0 416 aa7.56□□□□□ -1.2
LIG1-209ENST00000596104 TNCP24821 2201 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 PLECQ15149 4684 aaKnown RBP7.55□□□□□ -1.2
LIG1-209ENST00000596104 TRBV6-6A0A0A6YYG2 114 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 SHISA3A0PJX4 238 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 RBMXL2O75526 392 aaKnown RBP7.55□□□□□ -1.2
LIG1-209ENST00000596104 IGLV2-23P01705 113 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 CD1AP06126 327 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 CRYGBP07316 175 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 UBBP0CG47 229 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 TAS2R43P59537 309 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 RPS16P62249 146 aaKnown RBP7.55□□□□□ -1.2
LIG1-209ENST00000596104 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 UNC119Q13432 240 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 DYRK1AQ13627 763 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 C1orf100Q5SVJ3 147 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 PDPNQ86YL7 162 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 EDARADDQ8WWZ3 215 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 TMEM80Q96HE8 168 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 HDHD3Q9BSH5 251 aaPredicted RBP7.55□□□□□ -1.2
LIG1-209ENST00000596104 TMEM59Q9BXS4 323 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 TINAGL1Q9GZM7 467 aaPredicted RBP7.55□□□□□ -1.2
LIG1-209ENST00000596104 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
LIG1-209ENST00000596104 PEF1Q9UBV8 284 aaKnown RBP7.55□□□□□ -1.2
LIG1-209ENST00000596104 A0A0A6YYD4 124 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 RBMY1BA6NDE4 496 aaKnown RBP7.54□□□□□ -1.2
LIG1-209ENST00000596104 RBMY1EA6NEQ0 496 aaKnown RBP7.54□□□□□ -1.2
LIG1-209ENST00000596104 TMEM14DPA8MWL7 114 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 DYNC1I1O14576 645 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 OR2A4O95047 310 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 SCTP09683 121 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 RBMY1DP0C7P1 496 aaKnown RBP7.54□□□□□ -1.2
LIG1-209ENST00000596104 CELP19835 753 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 AADACP22760 399 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 ZBTB25P24278 435 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 CEACAM6P40199 344 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 HLA-DRB3P79483 266 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 QRFPP83859 136 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 MED21Q13503 144 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 INSL4Q14641 139 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 MRGPRG-AS1Q2M3A8 158 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 LRRTM1Q86UE6 522 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 PQLC1Q8N2U9 271 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 BVESQ8NE79 360 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms