RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 HBZP02008 142 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 SMIM18P0DKX4 95 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 OR5H8P0DN80 308 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
VPS4B-207ENST00000591519 SOX6P35712 828 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 FHL3Q13643 280 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 KIAA0141Q14154 515 aaPredicted RBP8.12□□□□□ -1.11
VPS4B-207ENST00000591519 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 LCNL1Q6ZST4 164 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 OR5M8Q8NGP6 311 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 MRPL30Q8TCC3 161 aaKnown RBP8.12□□□□□ -1.11
VPS4B-207ENST00000591519 C4orf3Q8WVX3 66 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 YIPF6Q96EC8 236 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 ARHGAP5-AS1Q96IT6 56 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 HSPB9Q9BQS6 159 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 PECRQ9BY49 303 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 KCNIP1Q9NZI2 227 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 GNG12Q9UBI6 72 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 AK3Q9UIJ7 227 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 RAB22AQ9UL26 194 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 LDLRAD4O15165 306 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 VDAC1P21796 283 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 HTD2P86397 168 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 RUNX1Q01196 453 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 LSAMPQ13449 338 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 MOGAT2Q3SYC2 334 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 IDNKQ5T6J7 187 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 ODF3L1Q8IXM7 274 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 OR56B1Q8NGI3 324 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 UBE2E2Q96LR5 201 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 ATG5Q9H1Y0 275 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 TAF9BQ9HBM6 251 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 OR2S2Q9NQN1 319 aa8.11□□□□□ -1.11
VPS4B-207ENST00000591519 I3L521 148 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 YPEL1O60688 119 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 GNB3P16520 340 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 INSL3P51460 131 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 TMEM50BP56557 158 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 GNMTQ14749 295 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 DEFB136Q30KP8 78 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 TIMM50Q3ZCQ8 353 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 PLAC9Q5JTB6 97 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 TPRA1Q86W33 373 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 OR52L2PQ8NGH6 319 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 LGALS14Q8TCE9 139 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 IL1F10Q8WWZ1 152 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 YPEL2Q96QA6 119 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 ZNF107Q9UII5 783 aaPredicted RBP8.1□□□□□ -1.11
VPS4B-207ENST00000591519 JPT1Q9UK76 154 aa8.1□□□□□ -1.11
VPS4B-207ENST00000591519 FOXI3A8MTJ6 420 aaPredicted RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 SEC14L6B5MCN3 397 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 HLA-DRB1P01911 266 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 PPP1CCP36873 323 aaKnown RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 RANBP1P43487 201 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 LUMP51884 338 aaPredicted RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 RAB25P57735 213 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 MRPS15P82914 257 aaKnown RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 FAM89BQ8N5H3 189 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 ZNF491Q8N8L2 437 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 MINDY2Q8NBR6 621 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 NPBQ8NG41 125 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 OR11H1Q8NG94 326 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 OR5H6Q8NGV6 325 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 OR10R2Q8NGX6 335 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 MAFIPQ8WZ33 124 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 RAB3CQ96E17 227 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 RBMXL1Q96E39 390 aaKnown RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 RITA1Q96K30 269 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 NABP2Q9BQ15 211 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 CMSS1Q9BQ75 279 aaKnown RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 KRTAP4-7Q9BYR0 210 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 NAA50Q9GZZ1 169 aaKnown RBP8.09□□□□□ -1.11
VPS4B-207ENST00000591519 KLK15Q9H2R5 256 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 OR51J1Q9H342 316 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 U3KQK5 164 aa8.09□□□□□ -1.11
VPS4B-207ENST00000591519 SORL1Q92673 2214 aa8.09□□□□□ -1.12
VPS4B-207ENST00000591519 IGHV7-81A0A0B4J1V7 117 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 METTL21EPA6NDL7 271 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 TRIM64CA6NLI5 447 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 RGS11O94810 467 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 NDUFA3O95167 84 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 CD3GP09693 182 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 OR8U8P0C7N1 319 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 RAB6AP20340 208 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ECI1P42126 302 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 SERPINB10P48595 397 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 RAB9AP51151 201 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ACTBP60709 375 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 VBP1P61758 197 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 NCS1P62166 190 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ARFRP1Q13795 201 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 MMDQ15546 238 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 ASPHD1Q5U4P2 390 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 LIN54Q6MZP7 749 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 FAM71F2Q6NXP2 309 aa8.08□□□□□ -1.12
VPS4B-207ENST00000591519 TMEM65Q6PI78 240 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms