RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	METTL15	A6NJ78	407 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619		A8MWP6	167 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	ZNF670-ZNF695	F2Z2N8	137 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	GEMIN2	O14893	280 aa	Known RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	TUSC2	O75896	110 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR7C1	O76099	320 aa	Predicted RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	IGLV2-23	P01705	113 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	IGHV3-23	P01764	117 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	KRT8	P05787	483 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR9G9	P0C7N8	305 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	EPHA2	P29317	976 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	MAP2K4	P45985	399 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	C15orf32	Q32M92	178 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	LY6G6F	Q5SQ64	297 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	C6orf141	Q5SZD1	244 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	ATAD3C	Q5T2N8	411 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	ZNF691	Q5VV52	312 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	TMEM244	Q5VVB8	128 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	CENPS	Q8N2Z9	138 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR51A4	Q8NGJ6	313 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	C17orf77	Q96MU5	243 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	FEV	Q99581	238 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	TSNAX	Q99598	290 aa	Known RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	IFI27L2	Q9H2X8	130 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	TAF9B	Q9HBM6	251 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	ADGRL4	Q9HBW9	690 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	CLN6	Q9NWW5	311 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	ABCD2	Q9UBJ2	740 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	CELA1	Q9UNI1	258 aa		4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.61	□□□□□ -1.67
DNMT1-222	ENST00000590619	NBDY	A0A0U1RRE5	68 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619		A0A1W2PQL4	384 aa	Predicted RBP	4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	NDUFAB1	O14561	156 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	RAB29	O14966	203 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	ST8SIA5	O15466	376 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR2J3	O76001	311 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	CDRT1	O95170	752 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	SPDEF	O95238	335 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	CA1	P00915	261 aa	Predicted RBP	4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	ISG15	P05161	165 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	GIG44	P09565	113 aa	Predicted RBP	4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	UBC	P0CG48	685 aa	Known RBP	4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	ARL3	P36405	182 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	HTD2	P86397	168 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	RSU1	Q15404	277 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	SLC25A30	Q5SVS4	291 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	C6orf183	Q5T699	404 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	DMKN	Q6E0U4	476 aa	Predicted RBP	4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR4A47	Q6IF82	309 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	FAM71F2	Q6NXP2	309 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	WDR93	Q6P2C0	686 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	CLEC19A	Q6UXS0	136 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	GAPT	Q8N292	157 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	STX19	Q8N4C7	294 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	NECAP1	Q8NC96	275 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR52N1	Q8NH53	320 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	MARC2	Q969Z3	335 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	ASB9	Q96DX5	294 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	CYYR1	Q96J86	154 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	CNN2	Q99439	309 aa	Known RBP	4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	TBX5	Q99593	518 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	SULT4A1	Q9BR01	284 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	TMBIM4	Q9HC24	238 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	RAB9B	Q9NP90	201 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	TVP23B	Q9NYZ1	205 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	FRRS1L	Q9P0K9	344 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	PIPOX	Q9P0Z9	390 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	ENOPH1	Q9UHY7	261 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	JPT1	Q9UK76	154 aa		4.6	□□□□□ -1.67
DNMT1-222	ENST00000590619	C15orf61	A6NNL5	157 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	SRRM4	A7MD48	611 aa	Known RBP	4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	GABRP	O00591	440 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	SULT1C4	O75897	302 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	MAS1	P04201	325 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	CLEC3B	P05452	202 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	MIF	P14174	115 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	CPE	P16870	476 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	FUS	P35637	526 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	RBM11	P57052	281 aa	Known RBP	4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	PSME3	P61289	254 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	GK3P	Q14409	553 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	NHLRC3	Q5JS37	347 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	FAM209B	Q5JX69	171 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	TTC9C	Q8N5M4	171 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	ZNF383	Q8NA42	475 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR2AK2	Q8NG84	335 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR10G2	Q8NGC3	310 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	OR2G2	Q8NGZ5	317 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	NEK7	Q8TDX7	302 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	TNFAIP8L1	Q8WVP5	186 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	ABHD14B	Q96IU4	210 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	PHB2	Q99623	299 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	AGMAT	Q9BSE5	352 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	KRTAP9-2	Q9BYQ4	174 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	EFCAB1	Q9HAE3	211 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619	MRGBP	Q9NV56	204 aa		4.59	□□□□□ -1.67
DNMT1-222	ENST00000590619		S4R3C0	116 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms