RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 OR5AN1Q8NGI8 311 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 CASTOR1Q8WTX7 329 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 DLX4Q92988 240 aaPredicted RBP13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 TMEM203Q969S6 136 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 CLCC1Q96S66 551 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 AGMATQ9BSE5 352 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 HDHD3Q9BSH5 251 aaPredicted RBP13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 TOLLIPQ9H0E2 274 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 PARP12Q9H0J9 701 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 NUBP2Q9Y5Y2 271 aa13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 HUWE1Q7Z6Z7 4374 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-211ENST00000590098 SLURP1P55000 103 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 ACTBL2Q562R1 376 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 CD200R1LQ6Q8B3 271 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 UNQ5815/PRO19632Q6UWF5 114 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 C12orf4Q9NQ89 552 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 OR1A1Q9P1Q5 309 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 METTL1Q9UBP6 276 aaKnown RBP13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 HSF4Q9ULV5 492 aa13.88□□□□□ -0.19
PRKCSH-211ENST00000590098 SLC17A2O00624 439 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 CPEP16870 476 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 TRAM1Q15629 374 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 RAB11BQ15907 218 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 AKIRIN2Q53H80 203 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 ZNF562Q6V9R5 426 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 FAM89BQ8N5H3 189 aa13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 DRAXINQ8NBI3 349 aaPredicted RBP13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 TSNAXQ99598 290 aaKnown RBP13.87□□□□□ -0.19
PRKCSH-211ENST00000590098 IGHV4OR15-8A0A075B7B6 117 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 A0A087WW49 117 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 ARL6IP5O75915 188 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 SCTP09683 121 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 HSMCR30P0CW71 290 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 RANBP1P43487 201 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 VEGFCP49767 419 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 TPPP2P59282 170 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 RPS16P62249 146 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 PSG5Q15238 335 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 LFNGQ8NES3 379 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 OR6Q1Q8NGQ2 317 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 PTX4Q96A99 478 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 FLYWCH2Q96CP2 140 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 MS4A10Q96PG2 267 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 CMSS1Q9BQ75 279 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 Q9N2K0 584 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 GAB2Q9UQC2 676 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 TPRKBQ9Y3C4 175 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 AK6Q9Y3D8 172 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 DNAH7Q8WXX0 4024 aa13.86□□□□□ -0.19
PRKCSH-211ENST00000590098 C3orf84H3BNL1 204 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 CA2P00918 260 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 IGHV3-11P01762 117 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 APOA2P02652 100 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 OR8U9P0C7N5 309 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 SPNP16150 400 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 PSMA1P25786 263 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 PITPNAQ00169 270 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 TPBGQ13641 420 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 IRF3Q14653 427 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 TMEM91Q6ZNR0 172 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 ARPC1AQ92747 370 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 ARHGAP5-AS1Q96IT6 56 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 OR4C12Q96R67 309 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 GFI1Q99684 422 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 PECRQ9BY49 303 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 SLA2Q9H6Q3 261 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 TPSG1Q9NRR2 321 aa13.85□□□□□ -0.19
PRKCSH-211ENST00000590098 TRDCB7Z8K6 153 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 ARPC1BO15143 372 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 SPDEFO95238 335 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 TFAP2AP05549 437 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 GP9P14770 177 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 TMEM50BP56557 158 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 RPS25P62851 125 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 MRPS15P82914 257 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 PDPNQ86YL7 162 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 OR56B1Q8NGI3 324 aa13.84□□□□□ -0.19
PRKCSH-211ENST00000590098 FOXI3A8MTJ6 420 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 PROP1O75360 226 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 TRGV3P03979 118 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 IGKV1-16P04430 117 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 CALRP27797 417 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 CLDN12P56749 244 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 OVCH2Q7RTZ1 564 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 SBSPONQ8IVN8 264 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 ZNF383Q8NA42 475 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 GRPEL2Q8TAA5 225 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 FAM3DQ96BQ1 224 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 RHOVQ96L33 236 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 CCDC90BQ9GZT6 254 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 ZNF355PQ9NSJ1 428 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 RDH8Q9NYR8 311 aa13.83□□□□□ -0.2
PRKCSH-211ENST00000590098 M0R1X1 148 aa13.82□□□□□ -0.2
PRKCSH-211ENST00000590098 DENRO43583 198 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms