RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 DGCR2P98153 550 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 GPR107Q5VW38 600 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 IL1F10Q8WWZ1 152 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 DUX3Q96PT4 197 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 MRPL20Q9BYC9 149 aaKnown RBP11.24□□□□□ -0.61
MBD1-220ENST00000589758 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 RIMS4Q9H426 269 aaPredicted RBP11.24□□□□□ -0.61
MBD1-220ENST00000589758 PIPOXQ9P0Z9 390 aa11.24□□□□□ -0.61
MBD1-220ENST00000589758 NAPSAO96009 420 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 HLA-DRB1P01911 266 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 TFAP2AP05549 437 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 ALDH3B2P48448 385 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 MRPS15P82914 257 aaKnown RBP11.23□□□□□ -0.61
MBD1-220ENST00000589758 CD69Q07108 199 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 DEFB136Q30KP8 78 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 PTX4Q96A99 478 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 OR51J1Q9H342 316 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 C12orf4Q9NQ89 552 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 KIAA1456Q9P272 454 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 KCNK7Q9Y2U2 307 aa11.23□□□□□ -0.61
MBD1-220ENST00000589758 SAA2-SAA4A0A096LPE2 208 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 RAB29O14966 203 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 NBR2O15453 112 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 SAA2P0DJI9 122 aaPredicted RBP11.22□□□□□ -0.61
MBD1-220ENST00000589758 HIST1H1DP16402 221 aaKnown RBP11.22□□□□□ -0.61
MBD1-220ENST00000589758 LIN54Q6MZP7 749 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 TMEM65Q6PI78 240 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 NPBQ8NG41 125 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
MBD1-220ENST00000589758 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 B9D2Q9BPU9 175 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
MBD1-220ENST00000589758 MGAT4AQ9UM21 535 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 ETV7Q9Y603 341 aa11.22□□□□□ -0.61
MBD1-220ENST00000589758 TRBV6-6A0A0A6YYG2 114 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 MFNGO00587 321 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 NDUFA3O95167 84 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.61
MBD1-220ENST00000589758 OR3A3P47888 321 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 HLA-DRB3P79483 266 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 FHL3Q13643 280 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 C5orf64Q2M2E5 130 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 CDNFQ49AH0 187 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 CROCCP3Q8IVE0 287 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 MAFIPQ8WZ33 124 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 SLC25A38Q96DW6 304 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 RITA1Q96K30 269 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 IFI27L2Q9H2X8 130 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 Q9N2K0 584 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 SLC23A1Q9UHI7 598 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
MBD1-220ENST00000589758 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
MBD1-220ENST00000589758 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 TRAV41A0A0B4J266 112 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 ATP6V0E1O15342 81 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 ST8SIA5O15466 376 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 GABARAPO95166 117 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 SCTP09683 121 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 CNTFRP26992 372 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 MC5RP33032 325 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 TALDO1P37837 337 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 RUNX1Q01196 453 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 CTF1Q16619 201 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 CLVS1Q8IUQ0 354 aaPredicted RBP11.2□□□□□ -0.62
MBD1-220ENST00000589758 ZNF491Q8N8L2 437 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 EDARADDQ8WWZ3 215 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 PARP11Q9NR21 331 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 SPATA2Q9UM82 520 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 VSIG4Q9Y279 399 aa11.2□□□□□ -0.62
MBD1-220ENST00000589758 TRAV18A0A075B6X5 111 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 TMEM235A6NFC5 223 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 SEC14L6B5MCN3 397 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 G3V318 75 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 HSPA12AO43301 675 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 FCGR3AP08637 254 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 ZBTB25P24278 435 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 SCAND1P57086 179 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 ZNF660Q6AZW8 331 aaPredicted RBP11.19□□□□□ -0.62
MBD1-220ENST00000589758 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 FAM131AQ6UXB0 335 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 TCTEX1D1Q8N7M0 179 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 SLC25A46Q96AG3 418 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 RNF5Q99942 180 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 DCSTAMPQ9H295 470 aa11.19□□□□□ -0.62
MBD1-220ENST00000589758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms